Gene RPB_1661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1661 
Symbol 
ID3908648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1889645 
End bp1890427 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content67% 
IMG OID637883555 
ProductABC transporter related 
Protein accessionYP_485280 
Protein GI86748784 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGT TGCTCGAAGT CAAAGGACTG GTGAAGTCCT ACGCCGGAGT TCATGCCGTG 
CGCGACGTCA GCTTCGCCGT GCGCCCCGGC GAAATCCTGG CGCTGATCGG CCCCAACGGC
GCCGGCAAGA GCACCTGCTT CAACATGCTC AACGGCCAGA TCCGGCCCGA TGTGGGCTCG
ATCAAGCTCG CCGGCGAGGA GATCGTCGGC CTGCCGCCCC GCACGGTGTG GCGGCGCGGC
GTCGGCCGCA CCTTCCAGAT CACTGCGACC TTCTCGTCGA TGACGGTGCG CGAGAATATT
CAGGTCGCGC TGCTGTCGTT TCACCGCCGG CTGTGGTCGA TGGTCGGCTA TGCGGGTGCG
AGCCATCGCG ACGAAGCGAA CGAACTCCTC GCCCTCGTCG GAATGCAGGA GCAGGCCGAG
CGGCCGTGCG GCGAACTCGC ATACGGCGAT CTGAAGCGGC TCGAGCTGGC CGTGGCGCTC
GCCAACCAGC CGCGGCTGCT GCTGATGGAC GAACCGACCG CCGGCATGGC GCCGAAAGAG
CGCGTCGAGC TGATGCGCCT CACCGCCGGC ATCGCCCGCG ACAAGGACAT CGGCGTGTTG
TTCACCGAGC ACGACATGGA TGTGGTGTTC GAGCACGCCG ACGAGGTGAT GGTGCTGAAC
CGTGGGCAAT TGGTCGCGCG CGGCACGCCG CAGCAGGTCC GCAACGATCC GCACGTGCAG
GCGATCTATC TCGGCGACGG CCTGCTCTAC GATCCCAAGC ATCGCAAGGA GGCCGTGCAA
TGA
 
Protein sequence
MTALLEVKGL VKSYAGVHAV RDVSFAVRPG EILALIGPNG AGKSTCFNML NGQIRPDVGS 
IKLAGEEIVG LPPRTVWRRG VGRTFQITAT FSSMTVRENI QVALLSFHRR LWSMVGYAGA
SHRDEANELL ALVGMQEQAE RPCGELAYGD LKRLELAVAL ANQPRLLLMD EPTAGMAPKE
RVELMRLTAG IARDKDIGVL FTEHDMDVVF EHADEVMVLN RGQLVARGTP QQVRNDPHVQ
AIYLGDGLLY DPKHRKEAVQ