Gene RPB_1622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1622 
Symbol 
ID3909899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1827408 
End bp1828466 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content71% 
IMG OID637883517 
Productglycosyl transferase, group 1 
Protein accessionYP_485242 
Protein GI86748746 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCC TGATCGCGAC TGACGCCTGG CATCCCCAGG TCAACGGCGT GGTGCGAACG 
CTGACCATGA TGGCCGAGGC GGCGAAGTCG CTCGGCGCCG AGGTCACGTT CCTGACGCCG
GAGACCTTCC CGACGGTGCG GCTGCCGAGC TACCCGGATC TGCGGATCGC CATTCCGAGC
CCGGCGAAAG TCGCGCGGAT GATCACCGCC GCGCAGGCCG ACTGCATCCA TATCGCGACC
GAAGGGCCGA TCGGCCTGGC GGCGCGGCGC TATTGCCGCA AGCGCGGCCT GCGCTTCACC
ACCAGCTTTC ACACCCGGTT CCCCGAATAC GTCTCGGCGC GGGCGCCGAT CCCGGAGTCC
TGGGTGTGGT CGCTGCTGCG CTGGTTTCAC GGTGCCAGCC ATGCGGTGAT GGCGGCAACG
CCGGCGCTGG CCGAAGAACT GCGCGGGCGG CGCTTCCGCA ATGTGGTGCT GTGGCCGCGC
GGCGTCGATG CCGGGCTGTT CCATCCGCGC GACGGCGCCG ATCTCGGGCT GACGCGGCCG
GTGTTCCTGT CGGTCGGCCG GGTCGCGGTC GAAAAGAACC TCGAGGCATT TCTGGCGCTC
GATCTGCCCG GCACCAAGGT CGTGGTCGGC GACGGACCGG CGCGGGCGGC GCTGCAGCGC
GACTTCCCGC AGGCGGTGTT CCTGGGCGCC AAGCAGGGCG AGGCGCTGGC GCAGGTCTAT
GCCGCCGCCG ACGTGTTCGT GTTTCCGAGC CAGACCGACA CCTACGGGCT GGTGCTGCTC
GAGGCGCTGG CGAGCGGCGT GCCGGTCGCG GCGTTTCCGG TGACCGGCCC GCGCGACGTG
ATCGGCGATG CCCCGGTCGG CGTGCTCAGC GACGATCTGC GGCAGGCCTG CCTCGGGGCG
CTGAATATCT CGCGCGATGC CTGTCTGGAT TTCGCCGCGG ACCACACCTG GGCCGCTTCG
GCGCGGGCCT TCATCGACAA CGTCACCCGG GTCTGGATGA TGGATCCCGG TGCGGCGCTG
GCCGAATCCG ACGCGAAGGC GCGCCGGCTG GTCGCCTGA
 
Protein sequence
MRILIATDAW HPQVNGVVRT LTMMAEAAKS LGAEVTFLTP ETFPTVRLPS YPDLRIAIPS 
PAKVARMITA AQADCIHIAT EGPIGLAARR YCRKRGLRFT TSFHTRFPEY VSARAPIPES
WVWSLLRWFH GASHAVMAAT PALAEELRGR RFRNVVLWPR GVDAGLFHPR DGADLGLTRP
VFLSVGRVAV EKNLEAFLAL DLPGTKVVVG DGPARAALQR DFPQAVFLGA KQGEALAQVY
AAADVFVFPS QTDTYGLVLL EALASGVPVA AFPVTGPRDV IGDAPVGVLS DDLRQACLGA
LNISRDACLD FAADHTWAAS ARAFIDNVTR VWMMDPGAAL AESDAKARRL VA