Gene RPB_1585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1585 
Symbol 
ID3910056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1784879 
End bp1786186 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content68% 
IMG OID637883481 
ProductUDP-glucose 6-dehydrogenase 
Protein accessionYP_485206 
Protein GI86748710 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1004] Predicted UDP-glucose 6-dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATAG CGATGATCGG AACCGGCTAT GTGGGGCTGG TGTCGGGGGC CTGCTTTGCC 
GATTTCGGCC ATGATGTGGT GTGTGTCGAC AAGGATGCCG GCAAGATCGC AGCGCTGCAT
CGCGGCGAGA TTCCGATCTA CGAGCCGGGA CTCGACGAAC TGGTGGCCGC GAACGTCAAG
GCGGGCCGGC TGGGCTTCAC CACCGATCTG ACGGCGCCGG TGGGCGAGGC CGACGCGGTG
TTCATCGCGG TGGGCACGCC GTCGCGGCGC GGCGACGGCC ATGCCGATCT CAGCTATGTC
TATGCGGCGG CGCGCGAGAT CGCCGCGGCG CTGAAGGGGT TCACCGTGGT GGTGACCAAG
TCGACGGTCC CGGTCGGCAC CGGCGACGAG GTCGAACGGC TGATCCGCGA GACCAATCCG
GACGCCGACG CCGCGGTCGC TTCCAATCCG GAATTCCTGC GCGAGGGCGC AGCGATCCGC
GACTTCAAGT TCCCGGACCG GATCGTGATC GGCACTTCCG ACGAGCGCGC GCGGAAAGTG
CTCGGCGAAA TCTATCGGCC GCTGTCGCTC AACCAGGGCC CGCTGATGTA CACCGCGCGG
CGCACCGCCG AACTGATCAA ATACGCCGCC AACGCGTTCC TGGCGACCAA GATCACCTTC
ATCAACGAGA TGGCCGATCT CGCCGAAAAG GTCGGCGCCG ACGTTCAGGA CGTCGCTCGC
GGCATCGGCA TGGACAACCG CATCGGCCCC AAATTCCTGC ATGCCGGCCC GGGCTTCGGC
GGCTCGTGCT TTCCCAAGGA CACCCGCGCG CTGGTCAAGA TCGGCGCCGA CCACGAGGTG
CCGCTGCGCA TCGTCGAGGC GGTGCTGGCG GTCAACGACA ACCGCAAGCG CGCGATGGCC
CGCAAGGTCG CACACGCGCT CGGCGGCAGC CTGCGCGGCA AGACCGTCGC GGTGCTCGGC
CTCACCTTCA AGCCGGACAC CGACGACATG CGCGAGGCGC CGTCGATCCC GCTGGTGACC
GGGCTGATGG ACATGGGCGC CAAGGTCCGG GCGTTCGACC CGGTCGGCAT GGCGCAGGCG
AAGGCCGAGC TGCCGGATAT CACCTATTGC GACGATGCTT ATACGTGCGC CGCGGGCGCC
GACGCGCTGG TGATCGTCAC CGAATGGGTG CAGTTTCGTG CGCTCGACCT GCCGCGGCTG
AAGGCCGCGA TGCAGCAGCC GGTGATCGTC GACCTGCGCA ACGTCTACCG CGCCGACCAG
ATGGCCGAGC ACGGCTTCGT GTATCACAGC GTCGGGCGGC CGAGCTGA
 
Protein sequence
MRIAMIGTGY VGLVSGACFA DFGHDVVCVD KDAGKIAALH RGEIPIYEPG LDELVAANVK 
AGRLGFTTDL TAPVGEADAV FIAVGTPSRR GDGHADLSYV YAAAREIAAA LKGFTVVVTK
STVPVGTGDE VERLIRETNP DADAAVASNP EFLREGAAIR DFKFPDRIVI GTSDERARKV
LGEIYRPLSL NQGPLMYTAR RTAELIKYAA NAFLATKITF INEMADLAEK VGADVQDVAR
GIGMDNRIGP KFLHAGPGFG GSCFPKDTRA LVKIGADHEV PLRIVEAVLA VNDNRKRAMA
RKVAHALGGS LRGKTVAVLG LTFKPDTDDM REAPSIPLVT GLMDMGAKVR AFDPVGMAQA
KAELPDITYC DDAYTCAAGA DALVIVTEWV QFRALDLPRL KAAMQQPVIV DLRNVYRADQ
MAEHGFVYHS VGRPS