| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1579 |
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| Symbol | |
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| ID | 3910050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1778653 |
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| End bp | 1779831 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637883475 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_485200 |
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| Protein GI | 86748704 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.409097 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATGG GCAGACGAAC ACTGCTGCAG GCCGCCTGCA TCGCGCTCGC AACCGCGGCT
CCGATCGCTG CGGCGCAGGC TCAGGAGACC TTCAAGGTCG GCCTGATCGT GCCGATGACC
GGAGGCCAGG CCTCGACCGG CAAGCAGATC GACAACGCGA TCAAGCTCTA CATCAAAAAG
CACGGCGATA CCGTCGCCGG CAAGAAGATC GAAGTGATCC TCAAGGACGA CGCCGCGATT
CCGGACAACA CCAAGCGGAT GGCGCAGGAG CTGATCGTCA ACGACAAGGT CAATGTGATC
GCCGGCTTCG GCATCACCCC GGCCGCGCTC GCCGCGGCGC CGCTGGCGAC GCAAGCCAAG
GTGCCGCAGG TGGTGATGGC CGCCGGCACC TCGATCATCA CCGAGCGATC GCCCTACATC
GTCCGCACCT CGTTCACGCT GGCGCAGTCC TCCACCATCA TCGGCGACTG GGCCGCCAAG
AACGGCATCA AGAAGGTCGC GACGCTGACC TCGGACTACG CGCCGGGCAA CGACGCGCTG
GCGGCGTTCA AGCAGCACTT CACCGCCGGC GGCGGCGCGA TCGTCGAAGA GATCAAGGTG
CCGCTCGCCA ATCCGGACTT CGCGCCGTTC CTGCAGCGCA TGAAGGACGC CAAGCCGGAC
GCGATGTTCG TGTTCGTGCC GGCCGGGCAG GGTGGCAGCT TCATGAAGCA GTTCGCCGAG
CGCGGCCTCG ACAAGAGCGG CATCAAGGTG ATCGGCCCCG GCGACGTGAT GGACGACGAC
CTCCTGAACA GCATGGGCGA TGCGGCGCTG GGCGTGGTCA CCGCGCACAT GTATTCGGCG
GCGCATCCCT CGGCGATGAA CAAGGAGTTC GTCGCCACCT ACAAGAAGGA TTTCGGCCAG
CGGCCGGGCT TCATGGCGGT CGGCGGCTAC GACGGCATCC ATCTGATCTA CGAGGCGCTG
AAGAAGACCG GCGGCAAGAC CGACGGCGAT TCGCTGCTCG CGGCGATGAA AGGGATGAGC
TGGGAAAGCC CGCGCGGCCC GATCTCGATC GACCCGGAAA CCCGCGACAT CGTCCAGGAT
ATCTACATCC GCAAGGTGGA AAAGGTCGAC GGCGAACTCT ACAACATCGA ATTCGCCAAA
TTCGACGCCG TGAAGGACCC CGGCAAGACG AAGAAGTAA
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| Protein sequence | MLMGRRTLLQ AACIALATAA PIAAAQAQET FKVGLIVPMT GGQASTGKQI DNAIKLYIKK
HGDTVAGKKI EVILKDDAAI PDNTKRMAQE LIVNDKVNVI AGFGITPAAL AAAPLATQAK
VPQVVMAAGT SIITERSPYI VRTSFTLAQS STIIGDWAAK NGIKKVATLT SDYAPGNDAL
AAFKQHFTAG GGAIVEEIKV PLANPDFAPF LQRMKDAKPD AMFVFVPAGQ GGSFMKQFAE
RGLDKSGIKV IGPGDVMDDD LLNSMGDAAL GVVTAHMYSA AHPSAMNKEF VATYKKDFGQ
RPGFMAVGGY DGIHLIYEAL KKTGGKTDGD SLLAAMKGMS WESPRGPISI DPETRDIVQD
IYIRKVEKVD GELYNIEFAK FDAVKDPGKT KK
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