| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1554 |
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| Symbol | |
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| ID | 3908753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1751867 |
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| End bp | 1752883 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637883450 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_485175 |
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| Protein GI | 86748679 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAACTC CGCCCGTTCT GGTGACCGGC GCTGCCGGCT TTATCGGCTT CCACGTCACG
CAGCAATTGC TGGCCAAGGG AAGCAAGGTC GTCGGCCTCG ACGTTCTGAA CGACTACTAC
GATCCGGCGC TGAAGCGGGC GCGGCTCGAC ATCCTGCAGC GCAATCCGGA TTTCACCTTC
GTGAAGCTCG ATCTCGCGGA TCGCGGGGCG ATCAAGGCGC TCTTCGCAGA GTACCGGTTC
GCCGTGGTGA TTCACCTCGC AGCGCAGGCC GGGGTTCGCT ACTCGATCGA AAATCCCTAT
GCCTATATCG ATTCCAACCT CGAGGGTTTC ATCAACGTGC TCGAGGGCTG TCGGCACAAC
GGATGCCGGC ATCTGCTGTA TGCGTCGTCC TCGTCGGTCT ATGGGGCCAA TACGAAGCTG
CCGTTTGCGG TCCAGGACAA TGTCGATCAC CCGATCAGTC TGTACGCGGC CACGAAGAAG
GCCAATGAGC TGATGGCGCA TGCCTACAGC CATCTGTATC GAATCCCGAC CACCGGGCTG
CGGTTCTTCA CCGTTTATGG TCCGTGGGGG CGGCCCGATA TGGCGATGTT CATCTTCGCC
AAGGCCATTA CGGAAGGCGC CCCGATCAAG CTGTTCAACC GCGGCATGAT GCGCCGCGAC
TTCACCTATG TGGACGACGT GAGCGAGGCC ATCGTCAGGC TGGTGGACAA GCCGCCACAA
GGCAATGCGG CTTGGTCCGG CGATCATCCG GATCCGGCGA GCAGCACCGC GCCGTGGAAG
ATCTACAATA TCGGCAACAA CAACCCGGAA GAACTGCTCC ACGTGGTTTC GCTGCTGGAG
AAGGAATTTG GGCGTCCGGC CCAGAAGGAG ATGCTGCCGA TGCAGCCCGG GGACGTGCCT
GCAACCTACG CCGACGTCGA GGATCTGATG CGGGACATCG GATTCCGCCC GTCGACGACG
ATCGAGCGTG GCGTCGCCGC ATTCGCGGCG TGGTATCGAG CGTATCACAA GCTCTGA
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| Protein sequence | MGTPPVLVTG AAGFIGFHVT QQLLAKGSKV VGLDVLNDYY DPALKRARLD ILQRNPDFTF
VKLDLADRGA IKALFAEYRF AVVIHLAAQA GVRYSIENPY AYIDSNLEGF INVLEGCRHN
GCRHLLYASS SSVYGANTKL PFAVQDNVDH PISLYAATKK ANELMAHAYS HLYRIPTTGL
RFFTVYGPWG RPDMAMFIFA KAITEGAPIK LFNRGMMRRD FTYVDDVSEA IVRLVDKPPQ
GNAAWSGDHP DPASSTAPWK IYNIGNNNPE ELLHVVSLLE KEFGRPAQKE MLPMQPGDVP
ATYADVEDLM RDIGFRPSTT IERGVAAFAA WYRAYHKL
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