Gene RPB_1543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1543 
Symbol 
ID3908742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1739152 
End bp1739895 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content59% 
IMG OID637883439 
Productglycosyl transferase family protein 
Protein accessionYP_485164 
Protein GI86748668 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGATC CTGGTCAAGC GCCTAGCCTT TCGATCGTGA CGGTGACGTA CAACAGCGCG 
GCCACCCTGT CCGACACTCT GAACAGTGTT CGCAGCCAGA CCTTCCGAGA CTTCGAGCAT
ATCGTCGTCG ATGGCGGATC GACGGACGGG ACGCTCGACA TTCTGAACGC CGCGGGCTCT
TCGGTGCGCT GGATTTCCGA ACCCGACAAG GGCATCTACG ATGCGATGAA CAAGGGCATC
GGGATGGCGC GTGGCCGCTG GATTCATCTG CTCAATTCGG ACGATTACTA CGCGTCGGAC
GATGTGCTGG CCCGCATCGT TCCGAAGCTG AAAGAGGATG CAGTCAACTA TTGTGACCTC
ATTCGGGCCG ACGCAAATGG TGGACGAGTC GTCCAGCGCT TCCCGTTCCG AAAATGGCCG
CTGTATTTTT CGGCTTACTT GCCGCATCCG TCTCTCGTCG TCTCGGCGGC TCAGTACGGG
GCGGTCGGAA CTTACGACGT CGGCTTCCGG GTCGCCGCCG ACCACGATAT GATTTTGCGA
CTGGTCGACC GCTTTCCTGC CAACCATATC CCGGTCGAAA TGACCGTGAT GCGTCAGGAC
GGAGTGTCGG CGACCAATCT GGATCTGAGC ATGCGGGAGT TCGGGATGGT GTTGCAGAAG
CACCGGCTTC CCGAACCGCT GATCACGGCC ATCATGGCGA TCCGACGGAT TTGGTGGAGG
TTGAGATCCA ATGAACGATC CTAA
 
Protein sequence
MRDPGQAPSL SIVTVTYNSA ATLSDTLNSV RSQTFRDFEH IVVDGGSTDG TLDILNAAGS 
SVRWISEPDK GIYDAMNKGI GMARGRWIHL LNSDDYYASD DVLARIVPKL KEDAVNYCDL
IRADANGGRV VQRFPFRKWP LYFSAYLPHP SLVVSAAQYG AVGTYDVGFR VAADHDMILR
LVDRFPANHI PVEMTVMRQD GVSATNLDLS MREFGMVLQK HRLPEPLITA IMAIRRIWWR
LRSNERS