Gene RPB_1536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1536 
Symbol 
ID3908450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1730181 
End bp1730876 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content66% 
IMG OID637883432 
Productacylneuraminate cytidylyltransferase 
Protein accessionYP_485157 
Protein GI86748661 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1083] CMP-N-acetylneuraminic acid synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCG CTGCTGTCAT CCCGGCACGC GGCGGGTCGA AGGGCATCCC GCGTAAGAAT 
CTCGCGCTGT GCGGCGACCG TTCGCTGCTC GCCTGGACCG CGCAGGCCGC GCTGGAGTCG
CAGGTGATCG ACGTCGCCAT GCTCTCGACG GATGACGATG AGATCGCCGA CGCGGGCAGG
GCGCTGGGGC TGGACGTGCC GTTCAGGCGA CCGGCCGAGT TGGCCGGGGA CGCGGCCCCG
ATGCTCGGGG TGATGCAGCA CTGCCTCGCC CATCTGCGCC GTGACGGCAC GGACGTCGAG
GCGCTCGTCT TGCTGCAGCC GACGTCGCCA TTCCGCCGCG CCCATCATGT CCGGGAAGCA
GTCCAGAGAT TTCGCGCCGG CCAGGCGGCG ACCCTGGTCA GCCTCGTGAG GGTCCCCCAT
CGCTTCGTGC CCGAAGGTCA AATGCGCGAG CAGGGTGGCG AGGTGGTCCC GTATTTCGGC
GGCGATATCG GAAAGACGCG ACGTCAGGAC AAGGAGGTGC TGTTCGGTAG AAACGGGCCG
GCCATCCTGA TCGTGCGCGC ATCCGTTCTC GACTCGGGCA GTCTCTACGG CCATCCGACG
ATCGGCTTTG AAATGGACGA AATTTCGTCG ATCGACATCG ATGCGCCGGA AGACCTCAGG
CTCGCGGATC ATCTGTTGCG AACGGGCTAT GCGTGA
 
Protein sequence
MTLAAVIPAR GGSKGIPRKN LALCGDRSLL AWTAQAALES QVIDVAMLST DDDEIADAGR 
ALGLDVPFRR PAELAGDAAP MLGVMQHCLA HLRRDGTDVE ALVLLQPTSP FRRAHHVREA
VQRFRAGQAA TLVSLVRVPH RFVPEGQMRE QGGEVVPYFG GDIGKTRRQD KEVLFGRNGP
AILIVRASVL DSGSLYGHPT IGFEMDEISS IDIDAPEDLR LADHLLRTGY A