Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1517 |
Symbol | |
ID | 3908431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1711728 |
End bp | 1712438 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637883413 |
Product | methionine sulfoxide reductase A |
Protein accession | YP_485138 |
Protein GI | 86748642 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0225] Peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00401] methionine-S-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTTCA TCAGCCGTCT TGCTCGTAGC GCCGCCGCCC TGAGCGCGCT GGCCCTGTCC GCGAGTTTCA CGCCCAGCCT TGCCGCCGAG GACGCGGTGG TGATCCCGCC GCCAGCGCTC GACGTCAGTT CGGCGGACGG CACCCAGACC GCGGTGTTCG CGGGCGGCTG TTTCTGGGGC GTGCAGGGCG TGTTCCAGCA CACGGCGGGC GTGCTCAACG CGGTGTCGGG CTATTCGGGC GGCAGCCAGG CGACCGCGAA CTACACGGCG ATTTCGACCG GCGCCACCGG CCACGCCGAG GCGGTGGAGA TCAAGTACAA TCCGAAACAG ATCAGCTACG GCCAGCTGCT GCAGATCTTC TTCTCGGTGG TGCACGATCC GACCCAGCTC AACCGGCAGG GCCCCGACGT CGGTACGCAA TATCGCTCGG CGATCTTCAC CGTGAACGAC GAGCAGAAGA AGGTCGCGGA CGCCTATATC GCCCAGCTCG ACGCCGCGCG GGTCTACAAG AAGCCGATCG TCACCAAGGT CGGCCCGCTG GACGGCTTCT ATGCCGCGGA GGCGTATCAT CAGGACTACC TGACGCTGCA CCCGACCCAG CCCTATATCG TCTATAATGA TCTCCCGAAG ATCGAGAACC TGAAGAAGCT GTTCCCGAAG GACTATCTCA CCAAGCCGAC GCTGGTGAGC AGCGCCAGGG CCACGAACTA G
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Protein sequence | MRFISRLARS AAALSALALS ASFTPSLAAE DAVVIPPPAL DVSSADGTQT AVFAGGCFWG VQGVFQHTAG VLNAVSGYSG GSQATANYTA ISTGATGHAE AVEIKYNPKQ ISYGQLLQIF FSVVHDPTQL NRQGPDVGTQ YRSAIFTVND EQKKVADAYI AQLDAARVYK KPIVTKVGPL DGFYAAEAYH QDYLTLHPTQ PYIVYNDLPK IENLKKLFPK DYLTKPTLVS SARATN
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