Gene RPB_1465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1465 
Symbol 
ID3908415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1654011 
End bp1654721 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content68% 
IMG OID637883359 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_485086 
Protein GI86748590 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.342125 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.439299 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCA TCGACACCTC TCTCGTTGCG AAACTGCCAC TGTTCGCGGG CTGCAGTGCC 
GACGAGCTCG ACGCCATCCT CAAGGAGGCC CGCTCGATCC GGGTTCCGAA GAACGGCAAC
GTGTTCGAGC AAGGCGAGGA CGCGCATTCG TTCTTCGTGC TGCTGCACGG CCATGTCCGC
GCCAGCAAGC TGACGCCGGC CGGCGAGCAG GTGGTGGTGC GCTATGTGGC GCCCGGCGAG
ACGCTGGGCG TCGCGATGGC GATCGGGCTG CCAAGCTATC CGGCGACGGC GACCGCGGTC
GACGACAGCG TGGTGCTGGC ATGGCCGACC GCGGCGTGGC CGCGCCTCGT CGAGCGCCAT
CCGGCGCTCG CCACCAACAC GCTGCGGACC GTCGGGGCCC GGTTGCAGGA AACCCATTCG
CGCGTCATTG AAATGTCGAC CCAACAGGTC GAGCAGCGCG TCGCCCGGGC ATTGCTGCGG
CTCGCCAAGC AATCCGGCCG CCCGGTCGAG ACCGGCGTCG AGATCGATTT TCCGATCAGC
CGGCAGGATA TCGCACAAAT GACGGGAACC ACACTGCACA CCGTCAGCAG ATTGCTGTCC
GGCTGGGAGA GCCGCGGCCT GATCGAGGGC GGCCGACGGC GCATCGTGCT GCGCGCGCCG
GATCAGCTCG TGGCGCTGGC GGAACAGACG CCCGACGACA CCGCGTCGTG A
 
Protein sequence
MATIDTSLVA KLPLFAGCSA DELDAILKEA RSIRVPKNGN VFEQGEDAHS FFVLLHGHVR 
ASKLTPAGEQ VVVRYVAPGE TLGVAMAIGL PSYPATATAV DDSVVLAWPT AAWPRLVERH
PALATNTLRT VGARLQETHS RVIEMSTQQV EQRVARALLR LAKQSGRPVE TGVEIDFPIS
RQDIAQMTGT TLHTVSRLLS GWESRGLIEG GRRRIVLRAP DQLVALAEQT PDDTAS