Gene RPB_1437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1437 
Symbol 
ID3908387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1625423 
End bp1626826 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content65% 
IMG OID637883331 
ProductNAD(P) transhydrogenase, beta subunit 
Protein accessionYP_485058 
Protein GI86748562 
COG category[C] Energy production and conversion 
COG ID[COG1282] NAD/NADP transhydrogenase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCA ATCTTTCCGC ACTTCTGTAT CTGATCGCCG GCGTCCTGTT CATTCTGTCG 
CTGCGTGGTC TGTCGTCGCC GGCCACCAGC CGTCAGGGCA ACCTGATGGG CATGACCGGC
ATGGGGATCG CGATCCTCAC CACGCTGGCC GGCCATCCGC CCGCCGACTT CCTCGGCTGG
GTGCTCGTCA TCCTCGGCAT CGCCATCGGC GGCGGCATCG GCGCGGTGAT CGCCAAGCGG
GTGCCGATGA CCTCGATGCC CGAACTGGTC GCGGCCTTCC ACTCGCTGGT CGGCATGGCC
GCGGTGCTGG TCGCCGCCGG CGCGTTCTAT GCGCCCGCAG CCTTCGACAT CGGCGTGCCC
GGCAACATCC ACGGCGCGAG CCTGGTCGAA ATGTCGCTCG GCGTCGCCAT CGGTGCGCTG
ACCTTCACCG GCTCGGTGAT CGCATTCCTC AAGCTGTCCG GCCGCATGAG CGGCGCGCCG
ATCATCTTGC CGGCGCGTCA CGTGGTGAAC ATCACGCTCG GTGTCATCAT GGTGGTTGCG
ATCATCGTGC TGGTGATCAC CGGCCACGAA TACGCCTTCT GGGTGATCAC CGCCGTCGCG
CTGCTGCTCG GCATCCTGAT GATCATCCCG ATCGGCGGCG CCGACATGCC GGTCGTGATC
TCGATGCTGA ACTCGTATTC CGGCTGGGCC GCCGCCGGCA TCGGCTTCAC GCTCGGCAAC
TCGGCGCTGA TCATCACCGG CGCGCTGGTC GGCTCCTCGG GCGCGATTCT GTCCTACATC
ATGTGCAAGG GCATGAACCG CTCCTTCATC TCGGTGATCC TCGGCGGCTT CGGCGGCGAG
ACCGCGGCTG CCGGCGGTGG CGGTGGCGAA CAGCGTCCGG CCAAGCTCGG CTCGGCCGAC
GACGCCGCCT TCATCATGAA GAACGCCCAG AAGGTCATCA TCGTGCCGGG CTACGGCATG
GCGGTGGCGC AGGCCCAGCA CGCGCTGCGC GAGATGGCCG ACACGCTGAA GAAGGAAGGC
GTCGAGGTGA AGTACGCGAT TCATCCGGTC GCCGGCCGTA TGCCGGGCCA CATGAACGTG
CTGCTCGCCG AAGCCAACGT GCCCTACGAC GAGGTGTTCG AACTCGAGGA CATCAACTCG
GAATTCGCGC AGGCCGACGT GGCCTTCGTG ATCGGCGCCA ACGACGTCAC CAACCCGGCC
GCCGAAGAGG ATCCGACCTC GCCGATCTAC GGCATGCCGG TGCTGCAGGT GTGGAAGGCC
GGCACCGTGA TGTTCATCAA GCGGTCGCTG GCGTCGGGTT ACGCCGGCAT CGACAACCCG
CTGTTCTATC GCGACAATAC GATGATGCTG CTCGGCGACG CCAAGAAGAT GACCGAGAAC
ATCGTCAAGG CGATGAATCA CTAA
 
Protein sequence
MNANLSALLY LIAGVLFILS LRGLSSPATS RQGNLMGMTG MGIAILTTLA GHPPADFLGW 
VLVILGIAIG GGIGAVIAKR VPMTSMPELV AAFHSLVGMA AVLVAAGAFY APAAFDIGVP
GNIHGASLVE MSLGVAIGAL TFTGSVIAFL KLSGRMSGAP IILPARHVVN ITLGVIMVVA
IIVLVITGHE YAFWVITAVA LLLGILMIIP IGGADMPVVI SMLNSYSGWA AAGIGFTLGN
SALIITGALV GSSGAILSYI MCKGMNRSFI SVILGGFGGE TAAAGGGGGE QRPAKLGSAD
DAAFIMKNAQ KVIIVPGYGM AVAQAQHALR EMADTLKKEG VEVKYAIHPV AGRMPGHMNV
LLAEANVPYD EVFELEDINS EFAQADVAFV IGANDVTNPA AEEDPTSPIY GMPVLQVWKA
GTVMFIKRSL ASGYAGIDNP LFYRDNTMML LGDAKKMTEN IVKAMNH