| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1345 |
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| Symbol | |
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| ID | 3907853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1531960 |
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| End bp | 1533459 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637883239 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_484966 |
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| Protein GI | 86748470 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.739165 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAATTTT TCACCGCGCA GCCTCGCAGC CCTTCGCTGT TCTGGATCAC CCTCACCGCC
CTGCTGATGC TGACGGCTCT GCCGCGGATC GCCTCGGCGG AAGCTCTGCT GCTGGTCGAG
GCCGATACCG GCAAGGTGCT GCAGGCGGAG AACGCCACCT ATCCATGGTA TCCCGCTTCG
GTCACTAAGA TCATGACCGC CTATGTGACG CTGAAGGCGG TGAAGGAAGG CCGGCTGACG
CTCGACTCGC TGTTGACCGT GTCGCCGGTC GCCGCGGCGC AATCGCCGTC GAAGATGGGC
TTCGCCCCCG GCACGCTGAT CACCGTCGAC AATGCGCTGA AGATGATGAT GGTGAAGTCG
GCCAACGACA TCGCCGTGGT GCTGGCCGAA GGCGTCGGCG GCTCGGTCGA CGGCTTCTCG
GACATGATGA ACACGACCGC GCAGCGGCTC GGCATGACCC AGACTCACTA CGTCAATCCG
AACGGACTGC CGGCCGAAGG CCAGGTCACC TCGGCGCGCG ATCTGGCGAT CCTGGCGCGC
GCGGTGTTGC GCGACCTGCC GGAATACGAG CACTTCATGC ACATCCCGGC GATCCGTTTC
GGCAAGCGTG TCACCCACAA TTTCAACAAG CTGATCGGCC GCTATCCCGG CGCCGACGGC
TTCAAGACCG GCTTCATCTG CGCCTCTGGC TACAATCTGG TCGCCAGCGC CACCCGCAAT
GGCCGACGCC TGATCGCGGT GGTGCTCGGC GCCAATTCCG GGCAGGACCG CGCGGTCAAG
GCGGCTCAAC TGCTCGAACG CGGCTTCTCG GCCAACACGC TGGCATGGCT GACGCCGTCG
CTCGGCACCG TCGACAACCT CGCGCCGATC GACGCCACCC CGCCCAACCT GCGCGACGAG
ATGTGCGGCC CCAAGCGCAA GCGCCCGGCC AGCGACGAGG ACGAGCAGGT CGCCAGCGTC
ATCGCCAATG GCGACACGAT GCTGTCGATG TTCTCGCCGC CGGCGCTGCG CCCGGTCGAC
ATGATCGCCG CCGCGCCCGC CCCGACCGAA CCGGTCCAGG TCTACACCGG GCCGACCCGG
ACCGGCGCAG CCTTGATCGC GGCCGCCGCC AGCGACGCCG AGCGCCAGGC CGCCGCCGGC
AAGAAGAAGC TCGCCAAAAA GAAGAATGCG AAGCCGAAAG ACGACGTCAA GGATGCCGCC
CTCGGCGAAA AGCACAACGG CCGTACGACG GTCACGATCG ATACCAGCAA GCCCAAACCC
GCCGCTGCCA AACCTGACGT AGCCAGGCCC GCGGCTGCCA AGCCCGCCGC TACCAAGCCC
GCCACCGCCA AGCCTGCCAA TGCCAAGCCT GCCGGCGCCA AAGCAGCCAA CGCAAAGCCA
GCCGCCAAGC CCGAGACGCC GGCCGCGGCC GACAAGCAGG CGCCCCCGGC CAAACCCAAG
GCGGCGGCCG CCAAGCCGGG ACCGAAAGCC GCGACCGGCG AGACCAGGCC CGGCACCTGA
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| Protein sequence | MQFFTAQPRS PSLFWITLTA LLMLTALPRI ASAEALLLVE ADTGKVLQAE NATYPWYPAS
VTKIMTAYVT LKAVKEGRLT LDSLLTVSPV AAAQSPSKMG FAPGTLITVD NALKMMMVKS
ANDIAVVLAE GVGGSVDGFS DMMNTTAQRL GMTQTHYVNP NGLPAEGQVT SARDLAILAR
AVLRDLPEYE HFMHIPAIRF GKRVTHNFNK LIGRYPGADG FKTGFICASG YNLVASATRN
GRRLIAVVLG ANSGQDRAVK AAQLLERGFS ANTLAWLTPS LGTVDNLAPI DATPPNLRDE
MCGPKRKRPA SDEDEQVASV IANGDTMLSM FSPPALRPVD MIAAAPAPTE PVQVYTGPTR
TGAALIAAAA SDAERQAAAG KKKLAKKKNA KPKDDVKDAA LGEKHNGRTT VTIDTSKPKP
AAAKPDVARP AAAKPAATKP ATAKPANAKP AGAKAANAKP AAKPETPAAA DKQAPPAKPK
AAAAKPGPKA ATGETRPGT
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