| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1344 |
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| Symbol | |
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| ID | 3907852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1530047 |
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| End bp | 1531765 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637883238 |
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| Product | Long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_484965 |
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| Protein GI | 86748469 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.77905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTCCC GGCGATGTGA GGAAAAGACC ATGGAGCGGA TCTGGCTCAA GCACTACCCG
CCGGGCGTGC CGGCGGACAT CGACGTGACG CAATACGCAT CGCTGGTCCA ACTGCTCGAG
GAGAGCTTCA GGGATTTCGG CGATCGCAAG GCCTTCATCT GCATGGACAA GGCGATCACC
TATCGCGAGC TCGACGAGAT GTCGGCCGCG CTCGGCGCCT ATCTGCAGGG CAAGGGCCTG
CAGAAGGGCG CGCGCGTCGC GCTGATGATG CCCAACGTCC TGCAATATCC GGTGGCGATC
GCGGCGGTGC TGCGCGCCGG ATTCGCCGTC GTCAACGTCA ACCCGCTCTA TACGCCCCGC
GAACTCGAGC ATCAGCTCAA GGACTCCGGC GCGGAAGCGA TCATCGTGCT GGAAAACTTC
GCCAGCACCG TCGAACAGGT GCTCGCCAAA ACCGCCGTCA AGCACGTGGT CCTCGCCACC
ATGGGCGACA TGCTCGGTTT CAAGGGCGTG ATCGTCAATC TGGTGGTGCG CAAGATCAAG
AAGATGGTGC CGGCCTATTC GCTGCCCAGC GCGGTGCCCT ACAACGAAGC AGTCGCCGCG
GGCCGCGGCC TCAAGCTCAC CAAGCCGACA CTCGGCCCCG ACGACGTCGC CTTCCTGCAA
TATACCGGCG GCACGACCGG CGTGTCCAAG GGCGCGACGC TGCTCCATCG CAACATCGTC
GCCAACGTCC TGCAGAACGA CGCCTGGCTG CAGCCGGCGC TGGCGAAGCC GCCGCATGTC
GATCAGCTGT TCATCGTCTG CGCGCTGCCG CTGTACCACA TCTTCGCGCT GACCGCCTGC
TACCTGCTCG GCGTGCGTGC CGGCGGCGTC AATCTGCTGA TTCCGAACCC GCGCGACATG
CCGGGCTTCA TCAAGGAACT GATGAAGTAT CAGGTCAACA GCTTCCCGGC GGTCAACACG
CTGTACAACG GCCTGCTGCA TTCGCCAGGC TTCGACAAGG TCGACTTCTC CAAGCTCAAG
ATCTCCAACG GCGGCGGCAT GGCTGTGCAG CGCCCTGTCG CTGAAGCCTG GCTGAAGATG
ACCGGCTGTC CGATCGCCGA AGGCTACGGC CTGTCGGAGA CCGCGCCGGT GCTGACCTGC
AACCCCGCCA CCGTCACCGA ATTCAACGGC ACGATCGGCG TGCCGGTGCC GTCGACCTAT
CTGTCGATCC GCGACGACGA GGGCAAGGAA GTGCCGTTCG GCACCCCCGG CGAAATCTGC
GCCATGGGTC CGCAGGTGAT GAGCGGCTAC TGGAACCGAC CGGACGAGAC CGCGCTGGTG
ATGACCGCCG ACGGCTATTT CCGCACCGGC GACGTCGGCG TGATGACGGA GGACGGCTTC
ACCAAGATCG TCGACCGCAA GAAGGACATG ATCCTGGTCT CCGGCTTCAA CGTCTATCCG
AACGAAGTCG AGGAAGTGAT CGCCACCCAT CCGGGCGTGC TGGAATGCGC CGTGATCGGC
GTGCCCGACA AGCGCACCAG CGAGGCGGTC AAGGCGTTCA TCGTCAAGAA GGACCCCGAC
CTCACCGCCG AGGACGTCAT CAAGTTCTGT CACACCCAGC TCACCAACTA CAAGGTGCCG
CGGCAGATCG AATTCCGCAC CACGCTGCCG AAGACCAATG TCGGCAAGAT CCTCCGCCGC
GAACTGCGCG ACGAGAAGAA GAACCAGGCG GCGGCTTAA
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| Protein sequence | MRSRRCEEKT MERIWLKHYP PGVPADIDVT QYASLVQLLE ESFRDFGDRK AFICMDKAIT
YRELDEMSAA LGAYLQGKGL QKGARVALMM PNVLQYPVAI AAVLRAGFAV VNVNPLYTPR
ELEHQLKDSG AEAIIVLENF ASTVEQVLAK TAVKHVVLAT MGDMLGFKGV IVNLVVRKIK
KMVPAYSLPS AVPYNEAVAA GRGLKLTKPT LGPDDVAFLQ YTGGTTGVSK GATLLHRNIV
ANVLQNDAWL QPALAKPPHV DQLFIVCALP LYHIFALTAC YLLGVRAGGV NLLIPNPRDM
PGFIKELMKY QVNSFPAVNT LYNGLLHSPG FDKVDFSKLK ISNGGGMAVQ RPVAEAWLKM
TGCPIAEGYG LSETAPVLTC NPATVTEFNG TIGVPVPSTY LSIRDDEGKE VPFGTPGEIC
AMGPQVMSGY WNRPDETALV MTADGYFRTG DVGVMTEDGF TKIVDRKKDM ILVSGFNVYP
NEVEEVIATH PGVLECAVIG VPDKRTSEAV KAFIVKKDPD LTAEDVIKFC HTQLTNYKVP
RQIEFRTTLP KTNVGKILRR ELRDEKKNQA AA
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