Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1312 |
Symbol | |
ID | 3907820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1494527 |
End bp | 1495051 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637883206 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_484933 |
Protein GI | 86748437 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.723682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.171791 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGGC CGCCGATCAA GCCGACAGGC ATCGAATGCC CGTTCGACGA GAACGAACTG ATCGTCTCGA AAACCAACCT CAAGGGTCAC ATCACCTACG CCAACGACGT CTTCATGCGG TTGTCGAAGT ACCCACGCAA CGAGGTGATC GGCGCGCCGC ACAGCATGAT CCGCCACCCC GACATGCCGC GCACGATCTT CAAGCTGCTG TGGGACACCA TCCAGGAGAA GAAGGAGATC TTCGCCTATG TGGTGAACAT GGCGCGCGAC GGCGACCACT ACTGGGTGTT CGCGCATGTC ACGCCGACGC TGGACGCCCA GAACAACGTC ATCGGCTTTC ACTCCAACCG CCGCAAGCCG GACCGCGCCC AGCTCGCCAA GATCGAGCCG CTCTACGCGC AATTGCGCGA GGAGGAAAAT CGCCACCGCA ATGCCAAGGA CGGCATGATG AGCGGTTATG CAATGCTGAC GGACATGCTG AAGAAGCAGG GTGTGGGATA TGACGAATTC ATCTTCGCTG TCTAA
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Protein sequence | MARPPIKPTG IECPFDENEL IVSKTNLKGH ITYANDVFMR LSKYPRNEVI GAPHSMIRHP DMPRTIFKLL WDTIQEKKEI FAYVVNMARD GDHYWVFAHV TPTLDAQNNV IGFHSNRRKP DRAQLAKIEP LYAQLREEEN RHRNAKDGMM SGYAMLTDML KKQGVGYDEF IFAV
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