Gene RPB_1289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1289 
Symbol 
ID3908162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1471688 
End bp1472536 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content70% 
IMG OID637883183 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_484910 
Protein GI86748414 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGAT TTGCCGTTGT CATTGCCTGC GTGGTGCCGT TGACGCTGGC GCTGCTGCCG 
CTGCAGCTCC TGGCGCTCCG CAACGAGTGG CGCATCCAGC GCACCATCCC TCGGTTGTAT
CACCGAATTT TGTGCAGGCT GATCGGCGTC CGGATCCGCG AGGTCGGCTG CCGCGACGGC
CATGGCCCGG TGCTGATTCT CGCCAATCAC GTCTCCTGGC TCGACATCTG CGTGATCTCG
GCGCTGGCGC CGGTGGCCTT CGTCGCGAAG AGCGAAGTCG CGGGCTGGCC GCTGTTCGGC
TTTCTGGCGA AGCTTCAGCG CACCATCTTC ATCGACCGCC AGGCACGGCA TCGCACCGGC
GACGCCACCG TCGAGATCGG CGGACGGCTG CGCGACGGCG ACGCCGTGGT GCTGTTCGCC
GAGGGCACGT CGAGCGACGG CAGCCGCGTG CTGCCGTTCC GCTCCGCGCT GATCGGCGCG
GTGCATCACG CGCTCGGCGA CGACGCACAG GCCGCGATCG GCGTGCAGCC GATGGCGGTG
ACCTACACCG GATTCGGCGG CCTGCCGATC GGCCGCGAAC TGCGCGAGCG CGTGGCGTGG
TACGGCGACG CCGATCTGAT TCCGCATTTC GTCGGTCTGC TGTCGTCCGG CGCCATCGAC
GTCACCGTGA GCTGGGGCGA GCCGATCGCG GCCTCGGCGA CCGATCGCAA GGCGATCGCA
CGCGACGCCG AGCAATCGGT GCGGCGGATG TGCGAGGCCG CGCGGCGCGC CGGCATCCGC
GATCCCATCG CGCCGCGTCC GAATGCTGCG CCTGTCGCGC GGCCGGACGC GCAGCTCGAG
CCGGCCTGA
 
Protein sequence
MIRFAVVIAC VVPLTLALLP LQLLALRNEW RIQRTIPRLY HRILCRLIGV RIREVGCRDG 
HGPVLILANH VSWLDICVIS ALAPVAFVAK SEVAGWPLFG FLAKLQRTIF IDRQARHRTG
DATVEIGGRL RDGDAVVLFA EGTSSDGSRV LPFRSALIGA VHHALGDDAQ AAIGVQPMAV
TYTGFGGLPI GRELRERVAW YGDADLIPHF VGLLSSGAID VTVSWGEPIA ASATDRKAIA
RDAEQSVRRM CEAARRAGIR DPIAPRPNAA PVARPDAQLE PA