| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1252 |
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| Symbol | |
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| ID | 3909186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1433326 |
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| End bp | 1434504 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637883146 |
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| Product | amide-urea binding protein |
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| Protein accession | YP_484873 |
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| Protein GI | 86748377 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0854371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.451875 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCCGC GCACGTCGTT CGCCCAGGCG CCGGCGACCT CCGTCGTCAA CACCACCGGC
CTCGCCGTGA CCGACACCGA GGTCACCGTC GGCATCCTGC ACTCCGTCAC GGGCACGATG
GCGATCTCCG AGACCGGCTC GGTGCAGGCC GAGAAGCTCG CGATCGAGCA GATCAACGCC
GCCGGCGGCG TGCTCGGCCG CAAGATCAAG TACATCCAGG AGGACGGCGC GTCCGACTGG
CCGAACTTCG CCGAGAAGGC CAAGAAGCTT CTCGTCAACG ACAAATGCGC CGCGGTGATG
GGCTGCTGGA CCTCGGCCTC GCGCAAGGCG GTGCTGCCGG TGTTCGAGCA GTACAACGGC
ATGCTGTACT ACCCGACCTT CTACGAAGGC CTCGAGCAGT CCAAAAACGT CATCTACACC
GGCCAGGAAG CCACCCAGCA GATCATCGCC GGCCTCGATT GGGTCAACAA GACCAAGAAC
GCCAAGAGCT TCTATCTGCT CGGCTCCGAC TACATCTGGC CGCGCACCTC CAACAAGATC
GCCCGCAAGC ACATCGAGAA TCACCTGCAG GGCTGCAAGG TCGTCGGCGA GGAGTACTTC
CCGCTCGGCC ACACCCAGTT CAACTCGGTG ATCAACAAGA TCAAGCTGAC CAAGCCGGAC
GTGATCTACG CGATCATCGT CGGCGGCTCC AACGTCGCGT TCTACAAGCA GCTCAAGGCG
GCCGGCATCG ATCTGTCGAA GCAGACCCTG CTCACCATCT CGGTCACCGA GGACGAGATC
GACGGCATCG GCGGCGAGAA CATCGCCGGC GCCTTCGCCT GCATGAAGTA CTTTCAGTCG
CTCGACAATC CGAACAACAA GGCATTCGTC GCCGCGTTCA AGAAGATGTG GGGCGAGAAG
ACGGTGATCG GAGACGTCAC CCAGGCTGCC TATCTCGGCC CGTGGCTGTG GAAATTGACC
GTCGAGAAGG CCGGCTCGTT CGACATCGAC AAGGTGGCGG CGGCGTCGCC GGGCGTGGAA
TTCAAGGGCG CGCCGGAAGG CTACGTCCGG GTCCACGAAA ACCACCACCT CTGGTCGAAG
ACCCGCGTCG GCAAGGCAAA GCTCGATGGC CAGTACGAAC TGGTCTACGA GACCGCCGAC
CTGGTCGAGC CCGATCCGTT CCCGAAGGGC TATCAGTAA
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| Protein sequence | MLPRTSFAQA PATSVVNTTG LAVTDTEVTV GILHSVTGTM AISETGSVQA EKLAIEQINA
AGGVLGRKIK YIQEDGASDW PNFAEKAKKL LVNDKCAAVM GCWTSASRKA VLPVFEQYNG
MLYYPTFYEG LEQSKNVIYT GQEATQQIIA GLDWVNKTKN AKSFYLLGSD YIWPRTSNKI
ARKHIENHLQ GCKVVGEEYF PLGHTQFNSV INKIKLTKPD VIYAIIVGGS NVAFYKQLKA
AGIDLSKQTL LTISVTEDEI DGIGGENIAG AFACMKYFQS LDNPNNKAFV AAFKKMWGEK
TVIGDVTQAA YLGPWLWKLT VEKAGSFDID KVAAASPGVE FKGAPEGYVR VHENHHLWSK
TRVGKAKLDG QYELVYETAD LVEPDPFPKG YQ
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