Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1243 |
Symbol | |
ID | 3909177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1421753 |
End bp | 1422631 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637883137 |
Product | TonB-like protein |
Protein accession | YP_484864 |
Protein GI | 86748368 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.122386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCGT TCGCGCTGCA CGAGCCGCCC GGCAAAGGCC GCGCCTCGCA ATGGCTGCTG TCGGCGGCGG CGATCGTCGC CGCGCATCTG GGCCTGATCG CTGCCGCGGT CGCCTGGTAT CAGCAGGCGC TACCGCCCGG CGTCGAGATG CCGGCGATCC TGGTCGACAT GGCGCCGGCG CCGTCTGCGC CCGCCGTGCA GCCGCAGGAC CTCGCGCCGG GTCCGCAGAT GCAGCAGTCG CAGGCTGCGC CTGAGCCGGT GAGGCAGGAC GAACCGGAGC CCGACCCGGT GAAGTCGGAA CCGGTGACAC GGGTGGCCGC GCAGCAGGCC GAACCGATCC CGGTGGCGCC GACGCCCGAG GTCGCGCTGC CGGTACCGGC GAGGCAGCCG GCGAAGCCGG ACGCAGCCGA GGTCGAGCGG CCGAAGGTCG CGCCGGTGAC CCGCGATCAG CCCAAGCGCA AGCCGGAGCG CGCCGAGCCG AAGCGGGCCT CGCGCGAGCC GCCGGCGCCG CGCACCACCG CCGCGCCGCG TGCCGAACGT CAGGCCGCGT TGCAATCGTC TCCGAATGCC GGCCGGGCCG CGGCGGCGGC CGCGCTGCCG TCGTATCGCG AGCGCCTCGC CGCGCATCTG GCGCGCTTCA AGCAATATCC GTCGTCGTCG AAGGCCGCCG GCGAGACTGG CACCGCGATG CTGAGCTTCA CCGTCGGCCG CCACGGCCAA GTGCTGGGCA GCCGGCTCGC ACGCTCGGCC GGCCATGCCG CGCTCGACGC CGAAACGATG GCGATGATCC GCCGCGCCCA GCCGCTACCG GCATTCCCGC CGGAGATGAC GCAGTCCTCG GCCAGCTTCA CCGTGCCGGT GATTTTCTCG CTGCGTTGA
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Protein sequence | MNAFALHEPP GKGRASQWLL SAAAIVAAHL GLIAAAVAWY QQALPPGVEM PAILVDMAPA PSAPAVQPQD LAPGPQMQQS QAAPEPVRQD EPEPDPVKSE PVTRVAAQQA EPIPVAPTPE VALPVPARQP AKPDAAEVER PKVAPVTRDQ PKRKPERAEP KRASREPPAP RTTAAPRAER QAALQSSPNA GRAAAAAALP SYRERLAAHL ARFKQYPSSS KAAGETGTAM LSFTVGRHGQ VLGSRLARSA GHAALDAETM AMIRRAQPLP AFPPEMTQSS ASFTVPVIFS LR
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