Gene RPB_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1243 
Symbol 
ID3909177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1421753 
End bp1422631 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content74% 
IMG OID637883137 
ProductTonB-like protein 
Protein accessionYP_484864 
Protein GI86748368 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.122386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGT TCGCGCTGCA CGAGCCGCCC GGCAAAGGCC GCGCCTCGCA ATGGCTGCTG 
TCGGCGGCGG CGATCGTCGC CGCGCATCTG GGCCTGATCG CTGCCGCGGT CGCCTGGTAT
CAGCAGGCGC TACCGCCCGG CGTCGAGATG CCGGCGATCC TGGTCGACAT GGCGCCGGCG
CCGTCTGCGC CCGCCGTGCA GCCGCAGGAC CTCGCGCCGG GTCCGCAGAT GCAGCAGTCG
CAGGCTGCGC CTGAGCCGGT GAGGCAGGAC GAACCGGAGC CCGACCCGGT GAAGTCGGAA
CCGGTGACAC GGGTGGCCGC GCAGCAGGCC GAACCGATCC CGGTGGCGCC GACGCCCGAG
GTCGCGCTGC CGGTACCGGC GAGGCAGCCG GCGAAGCCGG ACGCAGCCGA GGTCGAGCGG
CCGAAGGTCG CGCCGGTGAC CCGCGATCAG CCCAAGCGCA AGCCGGAGCG CGCCGAGCCG
AAGCGGGCCT CGCGCGAGCC GCCGGCGCCG CGCACCACCG CCGCGCCGCG TGCCGAACGT
CAGGCCGCGT TGCAATCGTC TCCGAATGCC GGCCGGGCCG CGGCGGCGGC CGCGCTGCCG
TCGTATCGCG AGCGCCTCGC CGCGCATCTG GCGCGCTTCA AGCAATATCC GTCGTCGTCG
AAGGCCGCCG GCGAGACTGG CACCGCGATG CTGAGCTTCA CCGTCGGCCG CCACGGCCAA
GTGCTGGGCA GCCGGCTCGC ACGCTCGGCC GGCCATGCCG CGCTCGACGC CGAAACGATG
GCGATGATCC GCCGCGCCCA GCCGCTACCG GCATTCCCGC CGGAGATGAC GCAGTCCTCG
GCCAGCTTCA CCGTGCCGGT GATTTTCTCG CTGCGTTGA
 
Protein sequence
MNAFALHEPP GKGRASQWLL SAAAIVAAHL GLIAAAVAWY QQALPPGVEM PAILVDMAPA 
PSAPAVQPQD LAPGPQMQQS QAAPEPVRQD EPEPDPVKSE PVTRVAAQQA EPIPVAPTPE
VALPVPARQP AKPDAAEVER PKVAPVTRDQ PKRKPERAEP KRASREPPAP RTTAAPRAER
QAALQSSPNA GRAAAAAALP SYRERLAAHL ARFKQYPSSS KAAGETGTAM LSFTVGRHGQ
VLGSRLARSA GHAALDAETM AMIRRAQPLP AFPPEMTQSS ASFTVPVIFS LR