| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1216 |
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| Symbol | |
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| ID | 3910151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1390031 |
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| End bp | 1391434 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637883110 |
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| Product | carotenoid oxygenase |
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| Protein accession | YP_484837 |
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| Protein GI | 86748341 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.548821 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCAGG TCACCGGAGT TCCGGATGCG TGCGATAATC TGGCGCCGAT CCCGATGGAG
TGCGACGCCG CGTTTCTGTC GATCAAGGGC GAGCTGCCGC GCGAATTGAA CGGCACGCTG
TATCGCAACG GCGCCAATCC GCAATTCGCA TCAAAGAACG CGCATTGGTT CTTCGGCGAC
GGCATGCTGC ATGCCTTCCG GCTGGAGAAC GGCCGCGCCA GCTATCGCAA CCGCTGGGTC
CGCACCCCGA AATGGCTGGC CGAGCACGAA GCCGGCCGGC CGCTTTACGG CGAGTTCAAT
CTCAAGCGGC CCGATGCGCC GCGTTCGGCG CCCGACGACG GCAACGTCGC CAACACCAAC
ATCGTGTTCC ACGCCGGCCG GCTGCTGGCG CTGGAAGAGG CGCATCTGCC GATCGAAATC
GAGCGCGACA CGCTGGCGAC GCGCGGCTAT TGCGACTATG GCGGGGCGCT GAAAGGGCCG
TTCACCGCGC ATCCGAAGAT CGACCCGGTC ACCGGCGAGA TGCTGTTCTT CGGCTACAAT
GCCGACGGCC CGTTGAAACG GACGATGTCG TTCGGCGCGA TCGACGCGTC CGGCCACGTC
ACCCGGTTCG AGCGCTTCAA GGCGCCCTAT GCAGCGATGG TGCACGATTT CATCGTCACC
GAGAACTATG TGCTGTTTCC GATCCTGCCG CTCACCGGCA GCATCTGGCG GGCGATGCGC
GGCCGCCCGC CTTATGCCTG GGACCCCGCT AAGGGCTCTT ACGTCGGCGT GATGAAGCGC
ACCGGCTCGA CCCGCGACAT CCGCTGGTTC CGCGGTGACG CCTGCTTCGT GTTCCACGTC
ATGAACGCGT GGGAGGACGG CACCAAGATC GTCGCCGACG TGATGCAATC CGAGGAAGCG
CCGCTGTTCA CCCATCCGGA CGGCCGCCGC ACCGATCCGG AGAAGGGCCG CGCCCGGCTG
TGCCGCTGGA GCTTCGACCT CGCCGGCAAC ACCAACGCCT TCACGCGCAG CTATCTCGAC
GACATCAGCG GCGAATTCCC GCGGATCGAC GAGCGCCGCG CCGGCCTGCG CAGCGGCCAT
GGCTGGTACG CCTGCGCCAG CCCGGAGACG CCGACGCTCG GGATGCTGAC GGGGCTGGTG
CATGTCGACG GCAACGGCGA TCGCCGCGCC CGCTATCTGC TGCCGACCGG CGACAGCATC
GGCGAGCCGG TGTTCGTGCC GCGCACGCCG GATGCGGCGG AAGCCGATGG CTGGATCCTC
ACGGTGATCT GGCGCGGCTG CGAGAACCGC AGCGACCTCG CGGTGTTCGA CGCCGCCGAC
ATCGCGGGCG GCCCGATCGC GCTGGTCCAA CTCGGCCACC GCGTCCCGGA CGGCTTCCAC
GGCAATTGGG TGGCGGCGGG GTGA
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| Protein sequence | MLQVTGVPDA CDNLAPIPME CDAAFLSIKG ELPRELNGTL YRNGANPQFA SKNAHWFFGD
GMLHAFRLEN GRASYRNRWV RTPKWLAEHE AGRPLYGEFN LKRPDAPRSA PDDGNVANTN
IVFHAGRLLA LEEAHLPIEI ERDTLATRGY CDYGGALKGP FTAHPKIDPV TGEMLFFGYN
ADGPLKRTMS FGAIDASGHV TRFERFKAPY AAMVHDFIVT ENYVLFPILP LTGSIWRAMR
GRPPYAWDPA KGSYVGVMKR TGSTRDIRWF RGDACFVFHV MNAWEDGTKI VADVMQSEEA
PLFTHPDGRR TDPEKGRARL CRWSFDLAGN TNAFTRSYLD DISGEFPRID ERRAGLRSGH
GWYACASPET PTLGMLTGLV HVDGNGDRRA RYLLPTGDSI GEPVFVPRTP DAAEADGWIL
TVIWRGCENR SDLAVFDAAD IAGGPIALVQ LGHRVPDGFH GNWVAAG
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