Gene RPB_1167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1167 
Symbol 
ID3910102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1338196 
End bp1338870 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content65% 
IMG OID637883061 
ProductErfK/YbiS/YcfS/YnhG 
Protein accessionYP_484788 
Protein GI86748292 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.398405 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCGA TGGCATCGAG ACTGGGACTG CTGGCGGTAG GTTTGCTGCT GTCGGGCTGC 
ATGCAGACCA CCTACCAGGC GGCGCCGGAA GCGACGCTGA AGCCGAACGA CAAGGCGCAG
CTCGCCAAAG CGCGCTACGC CAAGGTGTCG GTGCCGGAAC AGTTCCGCCG CGCCATCGTC
GACTATCACC GCAAGGAAAC GCCCGGCACC ATCGTGGTCG ATTCCGACAA TCATTATCTC
TACCTGGTGC AGGACGGCGG CAAGGCGATC CGCTACGGCG TCACCGTCGG CGAGGAAGCG
CTGGCCTTCT CCGGCATCGC CCGGGTCGGC AACATGGCGG AATGGCCGAA GTGGACGCCG
ACCGCGGACA TCCACAAGCG GATCGAAGGC CTGCCGGCCT CGGTGCCCGG CGGCGTCGAC
AACCCGCTCG GCGCCCGCGC GTTGTATCTC TATCAGGGCA ACCGCGACAC CCTGTTCCGG
ATCCACGGCA CCAACCAGCC GGAATATATC GGCGCCTCGA TTTCCTCGGG CTGCATCCGC
ATGACCAATG AGGACGTCAT CGACCTGTAC ACCCGGGTCA AGAACGGCAC CATCGTGGTG
GTGCTGGAGC CCAAGCACGG CGACTCGCCG TACAATTCGA AGATGGCGCA GGGCAGCGGC
ACCGCGACGC AGTAA
 
Protein sequence
MASMASRLGL LAVGLLLSGC MQTTYQAAPE ATLKPNDKAQ LAKARYAKVS VPEQFRRAIV 
DYHRKETPGT IVVDSDNHYL YLVQDGGKAI RYGVTVGEEA LAFSGIARVG NMAEWPKWTP
TADIHKRIEG LPASVPGGVD NPLGARALYL YQGNRDTLFR IHGTNQPEYI GASISSGCIR
MTNEDVIDLY TRVKNGTIVV VLEPKHGDSP YNSKMAQGSG TATQ