Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1129 |
Symbol | |
ID | 3909216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1297671 |
End bp | 1298177 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637883022 |
Product | hypothetical protein |
Protein accession | YP_484750 |
Protein GI | 86748254 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00426459 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.464003 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCGA TGCAACCAAT CCCGTCAGCG AGCGCCAGCA CTCCGTTCGG CGCAGATGGA GCTGCGCGCG CTGCGCAGCT CGCAGCGGCC AACATCAATC CCCGCACCGG CCTCGCCACC GACTATCTGA ATCACTTCAA CGAAGCGGTC ATGCTGCTCG AAATGATTCC CGATATGCCG GAATGCGCGG AAGATTTCCT CGCCTGGCAA CCGCTGTCCT ATGCCGAGCA TTTCAAAGCC TCGAACTTCA AGGCACGCGA CCTCGCGATC GAAGCCTATG AAACCGCCGA CCCCGGCATC CGCTCGGATT TCGACGACAT CATCGACAAC ATGACCCGGA TCCTCACCGC GGTCGGCGAT GCGATGCGCG GAGCCCAGCA GGACGCCACG CGCGCGCGAC TCGCCGAGGA GGCGGTCGGC TGGATCAAGC CGATGATCGG CCGCGCCGGC GGCGTCATCA ACGGCCAGGG CAGCGAGGCC GACGTCGACT ACATCATGGC GCACTGA
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Protein sequence | MSSMQPIPSA SASTPFGADG AARAAQLAAA NINPRTGLAT DYLNHFNEAV MLLEMIPDMP ECAEDFLAWQ PLSYAEHFKA SNFKARDLAI EAYETADPGI RSDFDDIIDN MTRILTAVGD AMRGAQQDAT RARLAEEAVG WIKPMIGRAG GVINGQGSEA DVDYIMAH
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