Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1105 |
Symbol | |
ID | 3910191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1271688 |
End bp | 1272563 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637882998 |
Product | nicotinate-nucleotide pyrophosphorylase |
Protein accession | YP_484726 |
Protein GI | 86748230 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.616034 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGCAA CGACTTTGCT GCATCCCGAC GCCTTCCTGT CGCCGCTGGC GATCGAGGAG GCCGTCGGCC GCGCGCTCGA CGAAGATCTC GGCCGCGCCG GAGATGTGAC TTCGATCGCC ACGATCCCGG AGGCGACCCA GGCGCACGCG GTCATGGTCG CGCGCCAGGC CGGCGTGATC GCCGGGCTGC CGCTGGCGGT CGCGGCGTTT CAGAGGCTGT CGCCCGACAT CGCCATCACC GCCCATGTCC GCGACGGCGA CGCGGTCGCG GCGGGCGTCA ACGTGCTGAC GCTGTCGGGG CCGGCACGGG CGATCTTGTC CGGCGAGCGC ACCGCGCTGA ACTTCGTCGG CCGGCTGTCG GGCATCGCGA CGCTGACCGC GGACTATGTC CGCCACACCT CCGGCACCAA GATGCGGATC TGCTGCACCC GCAAGACGAC GCCGGGGCTG CGCGCGCTGG AGAAATACGC GGTGCGCTGC GGTGGCGGCT TCAACCATCG CTTCGGGCTC GACGACGCGG TGCTGATCAA GGACAATCAC ATCGCGGTCG CCGGCGGCAT CCGCCCGGTG CTCGACAGCG CGCGGGCGAA GATCGGCCAT CTGGTGAAGA TTGAGATCGA GGTCGACACG CTCGATCAGT TGCAAGAGGT GCTCGACACC GGCATGGCCG ACGTCGTGCT GCTCGACAAC ATGGACATCG ACGCGCTGAA ACGCGCCGTG GCGATGGCGC AGGGTCGCGT CGTGCTGGAG GCTTCCGGCG GCGTCACCCG CGAGTCGATC AGCAGCATCG CCGCCACCGG CGTCGACTAC GCATCCGCCG GCGCGCTGAC TCACTCCGCG CCGAATTTCG ACGTCGCGCT GGATATCGAC GCGTAG
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Protein sequence | MIATTLLHPD AFLSPLAIEE AVGRALDEDL GRAGDVTSIA TIPEATQAHA VMVARQAGVI AGLPLAVAAF QRLSPDIAIT AHVRDGDAVA AGVNVLTLSG PARAILSGER TALNFVGRLS GIATLTADYV RHTSGTKMRI CCTRKTTPGL RALEKYAVRC GGGFNHRFGL DDAVLIKDNH IAVAGGIRPV LDSARAKIGH LVKIEIEVDT LDQLQEVLDT GMADVVLLDN MDIDALKRAV AMAQGRVVLE ASGGVTRESI SSIAATGVDY ASAGALTHSA PNFDVALDID A
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