| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1104 |
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| Symbol | |
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| ID | 3910190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1269952 |
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| End bp | 1271370 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637882997 |
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| Product | cell wall hydrolase, SleB |
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| Protein accession | YP_484725 |
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| Protein GI | 86748229 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3773] Cell wall hydrolyses involved in spore germination |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.690282 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGTCA TGCGTAACCG GCCGAAGGGC GCACGGATCG CGTCCTTCGG TCTCGGGCTC
TGCGTCTTCG CAGTGTTTCC GAACGAAATC GGCTATCAGG ATATTGCTTC GCTGCTGGTC
CGCCAGCCGG GCGTCACCGA GCGTTGGCAG AAGCGGATGT TCGCGTCGTC GTTCGGTTCG
ATCCAGGTCG CCACATTCTC GTTCGGACGC CCGATCGGCA CCTGGACGCC GCAGGTCGCC
AACTCCCGGC TCGCCAGCCT CGACGGCAGA TTCGGCCTGA GCGGGGCGAT GACCCGCAAT
CGGCTGGCGC AGCCGCCGCA GCCCTATCAG GCCTCCGATT TCCCGGCGGT CGATCGCACG
CTGAAGGGCG ATCGCCTTGC GATCTTCAAG CCGGAGCCCG CGTCGCCCGA CGACGCTGCG
CCGTCTGCGA CCGACGATTC GAACGCACCG AACGTCGCCG GTGCCAAGAT TGCTGCCAAG
CCTACCGCGC ACGAACCGAC CGAGACTTCG CCGCTCGATC CCGAACTCGC CGAAGCGCTG
CAGTCCGAGC CGTTGACGCC GTACGATGTC GCGCATGCGC TGGAGTCCGA TCCGCTGCAC
GCCGCCGGCC CGGCCGATGC GGCCGGGGCA CCGCCGCGCG ACCCTTTCAC CTTCAAGACC
GCGAGCCTGT TTTTCGGCAC CGGCTCGCTC GGCGGACCGG ATGAATCGCT GGAGCAGTGG
CAGCCCGGCG AAGAGCCGAT CATCGTCACG CCGCACGGGG CCGATCCGGA CATGAAGTCG
CCGCTGCTGT CGGCGACGGC CGTGGCGCCG GACGTGCCCG GCGAGACCAT CGCCGGCAAG
GGTGAGGTCA ATATCGACCG CCATGCGAGG ACGCCGGCCG AACGGCTCGG CCTGTCCGAT
CCGAAGCTGC GCGCCAGGCA CGAGAAGTGC CTCGCCGAGG CGGTGTATTT CGAATCGCGC
GGCGAAAAGG TGCGCGGCCA GATCGCGGTG GCGCAGGTGG TGCTGAACCG CGCCTTCTCC
GGTTTCTATC CGACCAATGT CTGCGGCGTG GTGTATCAGA ACAAGCACCG GCGGCTGGCC
TGTCAGTTCA CCTTCGCGTG CGATCGCGTC GCCGATATCG TGCGCGAACC GGAGATGTGG
GATCGCGCCC GGCGCATCGC CGCAGCGATG CTCGACGGCA AATTGTGGCT GCCCGAGGTC
GACAAGTCGA CGCACTACCA CGCCTATTGG GTGCGACCGT CCTGGGTCCA CGAGATGAAG
AAGATGTACA AGACCGGCGT CCACACCTTC TATCGCCCGC GCAAATGGGG CGACGGCAGC
GATGCCCCGA GCTGGGGCGA CGCCGCCCAA ACCGCCGCCA TTTCCGCCCA ACTCTCCGAA
GCCGCCAGGA GCTCGGCCGA GATCAGCGCG AAGAACTGA
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| Protein sequence | MSVMRNRPKG ARIASFGLGL CVFAVFPNEI GYQDIASLLV RQPGVTERWQ KRMFASSFGS
IQVATFSFGR PIGTWTPQVA NSRLASLDGR FGLSGAMTRN RLAQPPQPYQ ASDFPAVDRT
LKGDRLAIFK PEPASPDDAA PSATDDSNAP NVAGAKIAAK PTAHEPTETS PLDPELAEAL
QSEPLTPYDV AHALESDPLH AAGPADAAGA PPRDPFTFKT ASLFFGTGSL GGPDESLEQW
QPGEEPIIVT PHGADPDMKS PLLSATAVAP DVPGETIAGK GEVNIDRHAR TPAERLGLSD
PKLRARHEKC LAEAVYFESR GEKVRGQIAV AQVVLNRAFS GFYPTNVCGV VYQNKHRRLA
CQFTFACDRV ADIVREPEMW DRARRIAAAM LDGKLWLPEV DKSTHYHAYW VRPSWVHEMK
KMYKTGVHTF YRPRKWGDGS DAPSWGDAAQ TAAISAQLSE AARSSAEISA KN
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