Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1091 |
Symbol | |
ID | 3910177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1251941 |
End bp | 1252849 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637882984 |
Product | peptidase S49 |
Protein accession | YP_484712 |
Protein GI | 86748216 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.62395 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGATC CGGCGACGAG TGGTCGCAGC TCCGCGAGCC TGCTCGACAC TTTCGGCAAA TGGATTCCGG CCCGGTTCCG CTCCGATATT CCGGTCGTGC CGGTGGTGCG CCTGTCGGGC GTGATCGGCG CCGTCACGCC GCTGCGGCCG GGCATGTCGC TGGCGGGCGT CGCCAAGCTG CTGGAGCGTG CGTTCGCGAC GCGCAACGCC AAGGCGGTGG CGCTGGCGAT CAACTCGCCG GGCGGCTCGC CGGTGCAGTC GCGGCTGATC TATCTGCGCA TCCGCGCGCT GGCGGCCGAA AAGAAACTGC CGGTCTATGC TTTCGTCGAG GATGTCGCGG CCTCGGGCGG CTACATGATC GCCTGCGGCG CCGACGAGAT CTATTGCGAC CCCTCCTCGA TCGTCGGATC GATCGGCGTG GTCGGCGGCA GTTTCGGCTT TCAGGAACTG ATCAAGAAGA TCGGCGTCGA GCGCCGGCTG TACACCGCCG GCGAGCACAA GGCGCAGCTC GATCCGTTTC TGCCGGAAGA TCCCGGCGAC GTCGCCCGCG TCAAGGCGCT GCAGCAGGAG ATCCACGCGC TGTTCATTTC GCTGGTGAAA GACAGCCGCG GTGCGCGGCT GAAGGGCGAC GACGCCAAGC TGTTCTCCGG CGAGTACTGG GCCGGCGCGA CCTCGGTGTC GCTGGGTCTG TCCGATGCGA TCGGCGACCT CCGCGCGGTG CTGCGCGACA AATTCGGCGA CAAGGTGCGC ACGCCGGTGA TCGCGGCGCC GACCGGCTTG CTGTCGGGCC TGATGCGCAA ATCGTCGGGC GCCGGCACAG AGGCCTCGCT CGACGGCTTC GCGGCGCTGC CCGATCAGCT GATCTCGGCG CTGGAGGCGC GCGCGATCTG GGCGAAATAC GGCTTTTAG
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Protein sequence | MNDPATSGRS SASLLDTFGK WIPARFRSDI PVVPVVRLSG VIGAVTPLRP GMSLAGVAKL LERAFATRNA KAVALAINSP GGSPVQSRLI YLRIRALAAE KKLPVYAFVE DVAASGGYMI ACGADEIYCD PSSIVGSIGV VGGSFGFQEL IKKIGVERRL YTAGEHKAQL DPFLPEDPGD VARVKALQQE IHALFISLVK DSRGARLKGD DAKLFSGEYW AGATSVSLGL SDAIGDLRAV LRDKFGDKVR TPVIAAPTGL LSGLMRKSSG AGTEASLDGF AALPDQLISA LEARAIWAKY GF
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