| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1088 |
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| Symbol | |
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| ID | 3910174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1249447 |
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| End bp | 1250457 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637882981 |
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| Product | farnesyltranstransferase |
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| Protein accession | YP_484709 |
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| Protein GI | 86748213 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.720427 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGTAG TCGTACCTTT CGAAGGCCCC CCGCCCGCCT CGATCGATCA ATTGGTCGGA
CTTGTCGCGG CGGACATGGA GCGGGTCAAC GCCACCATCC TGTCGCGCAC CGGCTCGGAC
GTCACGATGA TCCCCGAGGT CGCGAACCAT CTGATCTCCT CGGGCGGCAA GCGGCTGCGG
CCGATGCTGA CGCTGGCGAT GGCCAACCTC ACCGGCTATG CCGGCGACGG CCACATCAAG
CTCGCCGCGG CGGTCGAATT CATGCACACC GCGACGCTGC TGCACGACGA CGTCGTCGAC
GAGAGCGAGA TGCGCCGCGG CAAGAAGTCG GCGCGGATGC TGTGGGGCAA CGAGGCCAGC
GTGCTGGTCG GCGACTTCCT GCTCGGCCAG GCGTTCCGGA TGATGGTCGA GGTCGGCTCG
CTGCGCGCAC TCGACATTCT GTCGGCGGCC TCGGCGACGA TCGCCGAAGG CGAGGTAATG
CAGCTCGCCG CCGCCAAGAA CACCGCCACC ACCGAGGACG AATATCTCGC GGTGATCCGC
GGCAAGACCG CCGAACTGTT CGCCGCCGCC TGCGAAGTCG GGCCCGCCAT CGCCGACCGG
CCGAAGGCCG AGCAGTCGGC CTGCCGCTCG TTCGGCATGA ACATCGGCAT CGCCTTCCAG
CTCGTCGACG ACGTGCTCGA TTACGGCGGC AAGGCCGCCA AACTCGGCAA GAATGTCGGC
GACGATTTCC GCGAGGGCAA GATCACGCTG CCGGTGGTGC TGGCGTTCCG CCGCGGCAAC
GATTCCGAGC GGGCGTTCTG GATCAAGGCG CTGGAGCGCG GCGAGATCAC CGAGGCCGAT
CTCGACCAGG CGATCAAGCT GATGACCAAG CACCGCGCCC TCGAGGACAC CATCCAGCGC
GCGCACCACT ACGGCGCGAT GGCCGTCGAC GCATTGGCGC TGTTCCCGTC GTCGCCGATG
AAAACCGCGC TGGAGCAGGT GGTGGCGTTC TGCTTGGCGC GGTCGCACTG A
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| Protein sequence | MAVVVPFEGP PPASIDQLVG LVAADMERVN ATILSRTGSD VTMIPEVANH LISSGGKRLR
PMLTLAMANL TGYAGDGHIK LAAAVEFMHT ATLLHDDVVD ESEMRRGKKS ARMLWGNEAS
VLVGDFLLGQ AFRMMVEVGS LRALDILSAA SATIAEGEVM QLAAAKNTAT TEDEYLAVIR
GKTAELFAAA CEVGPAIADR PKAEQSACRS FGMNIGIAFQ LVDDVLDYGG KAAKLGKNVG
DDFREGKITL PVVLAFRRGN DSERAFWIKA LERGEITEAD LDQAIKLMTK HRALEDTIQR
AHHYGAMAVD ALALFPSSPM KTALEQVVAF CLARSH
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