Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1074 |
Symbol | |
ID | 3908926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1234024 |
End bp | 1234935 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637882967 |
Product | hypothetical protein |
Protein accession | YP_484695 |
Protein GI | 86748199 |
COG category | [R] General function prediction only |
COG ID | [COG2321] Predicted metalloprotease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.737672 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.979079 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGACG ATGATTTCCG TCGCAGCGAC AATATCGACG ACCGACGCGA CAGCGGTGGT GGCGGCGGCG GCGGATTTCC GATGGGCGGC GGCGGATTGG GGATCGGCGC GATCGTCGTG CTCGGCCTGA TCGGCTGGGC CACGGGCATC GATCCGCGGC TGCTGATCAG CGGCGCCGAG ATGCTCACCG GCGGCGCGCC GACCCAGCAG AGCGAGCGGT CCTCGCCCGG CAAGCAGGGC GCGCCGACCG ACGACATGGG CAAGATGATC TCCGGCGTGC TCGGCGAGAT CGATGATCGC TGGACCGAAA TCTTCAAGGC CAATGGCCAG ACCTATGTCG GGCCGAAGAT CGTGCTGTTC CGCAATTCCA CCAATGGCGG TCGCTGCGGC ATGGCGCAAT CGGCGATGGG GCCGTTCTAT TGTCCGCCGG ACAAGCAGAT CTTCATCGAC ACCAATTTCT TCAAGCAGGT CGAAACCCGC TTCAAGGGCT GCTCCGGCAG CGCCTGCCGG TTCACGGCGG CCTACATCAT CGCCCACGAG GCCGGTCACC ACGTCCAGAA CCTGCTCGGT ATCCTGCCGC GCGTGACGCG CCTGCAGCAG CAGGCGGGCT CGCGCGCCGA ATCCAACGCG CTGCAGGTGC GCGTCGAATT GCAGGCCGAT TGCCTGTCCG GCGTCTGGGT CAACCGGGAG GAGAAGAAGC GGCCGAACTT CCTGGAGCCC GGCGATATCG ACGCGGCGTT GACCACGGCG AGCGCGATCG GCGACGACAC GCTGCAGCGC AACGCCGGCC GGGACGTGGT GCCGGATTCC TTCACCCACG GCTCGGCCGC GCAGCGCAAG CGCTGGTTCA TGACCGGCTA TCAGCAGGGC ACGATCCAGT CGTGCAACAC CTTCGCGGCG GAGAGGCTGT AA
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Protein sequence | MRDDDFRRSD NIDDRRDSGG GGGGGFPMGG GGLGIGAIVV LGLIGWATGI DPRLLISGAE MLTGGAPTQQ SERSSPGKQG APTDDMGKMI SGVLGEIDDR WTEIFKANGQ TYVGPKIVLF RNSTNGGRCG MAQSAMGPFY CPPDKQIFID TNFFKQVETR FKGCSGSACR FTAAYIIAHE AGHHVQNLLG ILPRVTRLQQ QAGSRAESNA LQVRVELQAD CLSGVWVNRE EKKRPNFLEP GDIDAALTTA SAIGDDTLQR NAGRDVVPDS FTHGSAAQRK RWFMTGYQQG TIQSCNTFAA ERL
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