Gene RPB_1069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1069 
Symbol 
ID3908921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1228626 
End bp1229153 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content71% 
IMG OID637882962 
Producthypothetical protein 
Protein accessionYP_484690 
Protein GI86748194 
COG category[S] Function unknown 
COG ID[COG5389] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCATA TCGTCGCAAA GCATCCCGTC ATGAGCAAGC CCGGCCCGAT CTACAAGCCC 
GGCCCGATCA GCGCCAGGCC GCTGTCGGGG CTGCTCGGCG CGACGCTCAA CGAGGCGTTC
GCCAAGCAGG GTTTTGCCGC GCGGGAACTG GTGACGCGCT GGCCGGAGAT CGCCGGCGCG
CAGATCGCCG CGCATTGCGA GCCGCTGAAG ATGCAATGGC CGCGCCCGGT CGAGGGCCAG
CCGCAGGAGC CGGCCACGCT GGTGCTGCGG GTCGAAGGCC CGATGGCGCT GGAAATCCAG
CATTCGTCCG ACCAGATCCT GCAGCGGGTC AACCGCTTCT TCGGCTGGGC CGCGGTCGGC
AAACTGGCGC TGCGCCAGGC GCCGTTGACG CGCAAGAGTC GCAAGCCGCT GCCGCAGCCG
CCGGACCCCG CCGCCGTCGC GCAGATCGCG GCCGGCCTCG ACGCCGTCGC GGACGACGAT
CTGCGCACCG CGCTGGCCCG GCTCGGCGCC ACGATCAAGC GGAATTGA
 
Protein sequence
MGHIVAKHPV MSKPGPIYKP GPISARPLSG LLGATLNEAF AKQGFAAREL VTRWPEIAGA 
QIAAHCEPLK MQWPRPVEGQ PQEPATLVLR VEGPMALEIQ HSSDQILQRV NRFFGWAAVG
KLALRQAPLT RKSRKPLPQP PDPAAVAQIA AGLDAVADDD LRTALARLGA TIKRN