Gene RPB_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1062 
Symbol 
ID3908914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1216446 
End bp1217681 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content67% 
IMG OID637882955 
Productcytochrome P450 
Protein accessionYP_484683 
Protein GI86748187 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2124] Cytochrome P450 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGGT GGGAGGTGCA GCCGCATCAA CACCCGAGGA ATCGCCCGAT GTTCAGCTTC 
GATCCCTACT CCCCCGCGGT CGATGCCGAC CCCTTTCCGC TGTACAAGAC CCTGCGCGAC
GAGCATCCGG TGTATTGGAG CGAACCGGCG CAGATGTGGG TGCTGTCGCG CTACATCGAC
GTCGCCTCCG CCGGCACCAA TTGGCAGGTG TTCTCCTCGG CCAAGGGCAA TCTGATGACC
GAGCTGCCGG GCCGCGCCGG CGCCACGCTC GGCACCACCG ACCCGCCGCG CCACGACCGG
CTGCGCGGTC TCGTCCAGCA CGCCTTCATG AAGCGCAATC TCGAGGCGCT GGCCGAGCCG
ATGCGCGACA TCGCGCGCGA GGCGGCCGAG GCGCTGCGCG GCCGCGAGCA GTTCGACTTC
ATCGCCGACT TCTCGTCGAA ATTCACCGTG CGGGTGCTGT TCGCCGCCTT GGGCCTGCCG
CTCGGCGACG AGCAGACGGT GCGCGACAAG GCGGTGCTGA TGGTGCAGAG CGACCCGGTC
AGCCGCGCCA AGGGGCCGGA ACATCTCGCC GCCTATGCGT GGATGCAGGA CTACGCGGCC
AAGGTGATCG CGCAGCGGCG CGCCGAACCA CAGAACGACC TGATCTCGCA TTTCAGCATG
GCGGAGATCG ACGGCGACAA ATTGGACGAG CGCGAGGTGC TGCTGACGAC GACGACGCTG
ATCATGGCCG GGATCGAATC GCTCGGCGGC TTCATGAGCA TGCTGGCGCT GAATCTCGCC
GACTATGCCG ATGCCCGCCG CGCGGTGGTC GCCGATCCGG CGCGGCTGCC GGACGCGGTC
GAGGAGTCGC TGCGCTACAA CACCTCGGCG CAGCGCTTCA AACGCTGCCT GCAGACCGAC
CTGACGCTGC ACGGCGTCAC CATGAAGGCC GGCGATTTCG TCTGCCTCGC CTACGGCTCC
GCCAATCGCG ACGAGCGGCA GTTTCCCAAT CCGGACGTCT ACGATCTGGC GCGCAAGCCG
AAGGGCCATC TCGGCTTCGG CGGCGGCGTC CACGGCTGCC TCGGCTCGGC GATCGCCAGA
ATGGCGATCA AAATCGCGTT CGACGAGTTT CACAAGGTGG TGCCGGACTA CACGCGGGTG
CAGCCGCGGC TCGACTGGAT GCCGTCCTCG ACCTTCCGCA GCCCGCTGCG GCTGGAGATG
GCGGTCGAGC GTGCAGAATC ACGCAACGCG GCGTAG
 
Protein sequence
MTRWEVQPHQ HPRNRPMFSF DPYSPAVDAD PFPLYKTLRD EHPVYWSEPA QMWVLSRYID 
VASAGTNWQV FSSAKGNLMT ELPGRAGATL GTTDPPRHDR LRGLVQHAFM KRNLEALAEP
MRDIAREAAE ALRGREQFDF IADFSSKFTV RVLFAALGLP LGDEQTVRDK AVLMVQSDPV
SRAKGPEHLA AYAWMQDYAA KVIAQRRAEP QNDLISHFSM AEIDGDKLDE REVLLTTTTL
IMAGIESLGG FMSMLALNLA DYADARRAVV ADPARLPDAV EESLRYNTSA QRFKRCLQTD
LTLHGVTMKA GDFVCLAYGS ANRDERQFPN PDVYDLARKP KGHLGFGGGV HGCLGSAIAR
MAIKIAFDEF HKVVPDYTRV QPRLDWMPSS TFRSPLRLEM AVERAESRNA A