Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1061 |
Symbol | |
ID | 3908913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1215467 |
End bp | 1216324 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637882954 |
Product | protocatechuate 4,5-dioxygenase subunit beta |
Protein accession | YP_484682 |
Protein GI | 86748186 |
COG category | [S] Function unknown |
COG ID | [COG3384] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACGA TCATCGGCGG CCTCGCCGCC TCCCACGTGC CCGCGATCGG CGGCGCGATC GCCAAGGGCC TGCAGAAGGA CCCGTATTGG GCGCCGTTCT TCGACGGCTT CGACGCCACG CATCGCTGGC TCGACGCGGT GAAGCCCGAC GCCGCGGTGG TGATCTACAA CGATCACGGC CTCAACTTCT TCCTCGACAA GATGCCGACC TTCGCGGTCG GCGCGGCGCC GGAGTATCGC AACGACGACG AGGGCTGGGG CATCCCGGTG CGCGCGCCGT TCCGCGGCGA CACCGCGCTG TCGTGGCACA TCATCGAGAC GCTGGTCGGC GCCGAATTCG ATCCGGTCAC CTGCCAGGAG ATGCTGGTCG ACCACGCCTA CAGCCTGCCG ATGGAACTGT TCTTTCGCGA AAGGGCGCAC GACATCCCGA CCGTGCCGGT GGTCGTCAAC ACCGTGCAGC ATCCGCTGCC GTCGCTGCGC CGCTGCTTCA AGCTCGGCCA GGCGATCGGC CGCGCCATCG AATCCTATCC TGAAGATCTG AAAGTCGTGG TGATCGGCAC CGGCGGGCTG TCGCACCAGC TCGAAGGCGA GCGCGCCGGC TTCATCAACA CCGCCTTCGA CCGCCGCTGC ATGGACGCGA TGACCGGCGA TATCGACAGC CTCTTGACGA TCGACCCGCA CGAGCTGGTC GAACTCGCCG GCAGCCAGGG CGTCGAAGTG ATGAACTGGG TGGCAATGCG CGGCGCGCTC ACCGGCGACG TCCACGAGCT GCACCGCAAC TATCATCTGC CGATCTCCAA CACCGCGTCG GGAATCATGC TGCTGGAGAA TAGGCCGAAG CTGGCGCAGG CGGCGTAG
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Protein sequence | MATIIGGLAA SHVPAIGGAI AKGLQKDPYW APFFDGFDAT HRWLDAVKPD AAVVIYNDHG LNFFLDKMPT FAVGAAPEYR NDDEGWGIPV RAPFRGDTAL SWHIIETLVG AEFDPVTCQE MLVDHAYSLP MELFFRERAH DIPTVPVVVN TVQHPLPSLR RCFKLGQAIG RAIESYPEDL KVVVIGTGGL SHQLEGERAG FINTAFDRRC MDAMTGDIDS LLTIDPHELV ELAGSQGVEV MNWVAMRGAL TGDVHELHRN YHLPISNTAS GIMLLENRPK LAQAA
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