| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0985 |
|---|
| Symbol | |
|---|
| ID | 3909282 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 1130369 |
|---|
| End bp | 1131472 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637882878 |
|---|
| Product | electron transfer flavoprotein subunit beta |
|---|
| Protein accession | YP_484606 |
|---|
| Protein GI | 86748110 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2025] Electron transfer flavoprotein, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.104458 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGC CAGCAAAGCC TGCCCCGCCC GCCGGACGCG CCAACGCCAA GAAGGAGCTG
TCCGAGCACT TCAAGCAGTA CAAGCACGTC TGGGTGTTCG TCGAGCAGGA GCGCGGCCAC
GTCCACCCGG TGTCCTGGGA GCTGATGGGC TCCGGCCGCC GTCTCGCCGA CAAGCTCGGC
GTCGAGCTCG CCGCGGTGGT GATCGGCCCG GCCGGCGAGG CGACCAGCGC GGCGGCGGCG
GAATCGTTCT GCTACGGCGC CGATCTCGCC TACATCGTCG CCGACGACGT GCTCACCGAT
TATCGCAACG AATCCTACAC CAAGGCGCTG ACCGATCTGG TCAACACCTA CAAGCCCGAG
ATCCTGCTGC TCGGCGCCAC CACGCTCGGC CGCGATCTCG CCGGCGCCGT CGCGACCACG
CTGCTGACCG GCCTCACCGC CGACTGCACC GAGCTCGAGG TCGACGCCGA CAATTCGCTC
GCCGCGACCC GGCCGACCTT CGGCGGCTCG CTGCTGTGCA CGATCTACAC GCTGAACTTC
CGGCCGCAGA TGGCGACCGT GCGGCCGCGC GTGATGGAAA TGCCGGAGCG CGTCGAGAAG
CCGGTCGGCC GCATCATCGA ATTCCCGCTC GGCATGGTCG AGGACGACAT CGTCACCAAG
ATCCTGGCGT TCGTGCCGGA TCGCGACAAG GCGACCTCGA ACCTGGCCTA CGCCGACATC
GTCGTCGCCG GCGGCATGGG GCTCAACTCG CTGGAGAACT TCCAGCTGGT GCGCCAGCTC
GCCGGCGTGC TCGGCGCCGA ATATGGCTGC TCGCGGCCGC TGGTGCAGAA GGGTTGGGTC
TCGGCCGATC GCCAGATCGG CCAGACCGGC AAGACGATCC GGCCGAAGCT GTACATCGCG
GCCGGCATTT CCGGCGCGAT CCAGCATCGC GTCGGCGTCG ACGGCGCCGA TCTGATCGTC
GCCATCAACA CCGACAAGAA CGCGCCGATC TTCGACTTCG CGCATCTGGC GATCGTCACC
GACGCGATCC GCCTGCTGCC GGCGCTGACC GAAGCATTCC GCAAGCGGCT GTCGCCGCAC
ACCCGCGACC GCATCGCGAG CTAA
|
|---|
| Protein sequence | MSQPAKPAPP AGRANAKKEL SEHFKQYKHV WVFVEQERGH VHPVSWELMG SGRRLADKLG
VELAAVVIGP AGEATSAAAA ESFCYGADLA YIVADDVLTD YRNESYTKAL TDLVNTYKPE
ILLLGATTLG RDLAGAVATT LLTGLTADCT ELEVDADNSL AATRPTFGGS LLCTIYTLNF
RPQMATVRPR VMEMPERVEK PVGRIIEFPL GMVEDDIVTK ILAFVPDRDK ATSNLAYADI
VVAGGMGLNS LENFQLVRQL AGVLGAEYGC SRPLVQKGWV SADRQIGQTG KTIRPKLYIA
AGISGAIQHR VGVDGADLIV AINTDKNAPI FDFAHLAIVT DAIRLLPALT EAFRKRLSPH
TRDRIAS
|
|---|
| |