Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0931 |
Symbol | |
ID | 3909785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1076022 |
End bp | 1077746 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 637882824 |
Product | ABC transporter related |
Protein accession | YP_484552 |
Protein GI | 86748056 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTGCAC GACCCGCCGA GTCCATCGCG CTGCTGCGTT CGCTGCGCCC CGTCGCCGGA GGCCACGCCC GCGTCGCGGC GGTCGCGGCC GCGGTCGGCG GCGTGTTGGC GGTTGCGACC GCGCAACTGA TCGCGATCGT GGTGGACCGG CTGGTGTTCG GTCCTGCGGC GCTGCCGGCG GTGGCGCCGC TTCTCGCGTT GCTCGGCGGC GTCGCGGTGC TGCGCGCCGC GGCGGCGTGG CTCACCGAGC GGGCGGCGTT CGAAGCCTCG GCCAAGGTGA GGCGGCATCT GTTCAGGCGG GCGCTGGAGC GGGTGTCGGC GCTCGGCCCG GTGCGACTCG GTGAACATCC GCCGGGCGAA CTGGTGGCGC TGCTGACCGA CTCGCTCGAC GCGGTGGCGC CGCTGTGGCG CGCGTGGCAG CCGGCGATCG TGCGCGCCGC GGTGGTCCCG GTCGCGGTGC TGGCGATCGT GGCGTGGCGC GATCCGCTGG CGGCGGGCAT CCTTCTCGTC GCGCTGCCGC TGCTGGTGTG GTTCTCGATC CTGGCCGGGC AGGGCGCCGA GCGGGCGAGC GGCGAGCGTT GGGCGGGCCT CGCCCGGCTC GGCGGCCACC TGCTCGATCA GATCCGCGGG CTGCCCGAAC GCAAGCTCGC CGGCACCGCG GGCCGCGCCA TCGCCGCGGT GAAGGACGCC GCCGAGCGCT ACGGCCGCGA GACCATGGCG GTACTGCGGA TCGCGTTTCT GTCGGCGCTG GTGGTGGAGT TCGTCGCGAC CGCGGCGATC GCCGGCGTGG CGATCGCGGT CGGGTTCCGG CTGCTGTGGG GCGAGATGGA TTTCGCCACC GGGCTGTTCG TGCTGCTGCT GGCGCCGGAG TTCTTCGCGC CGCTGCGCGA CATCGGCGCC CGCCGCCACG CCAAGCTCGA AGCGCTGACC GCGCTCGACA AACTGGCGCC GCTGCTCGAC GCGCCGCCCG CCGTCGGCCG GCCGTACATT GCGGCGGGGC CGCCGGCGAT CCGGTTCGAC GACGTCCGCG TCGTCCATGC CGACGGCCGC GTCGCGCTCG ACGGCTTCAG CCTCGACATC GCCGCCGGCG AGCACGTCGC GCTGGTCGGC CCGTCCGGCG CCGGCAAGAG CACCGTGTTG GCGCTGCTGC TGCGGTTCGT CGAGCCGAGC AGCGGCCGGG TGCTGATCGA CGGTGCGCCG CTGTCCGAGA TCGATCCGGC GGCATGGCGG CGGGCGCTGG TGGCGATGCC GCAGACGCCG CAGTTCTTCG AGGGCAGCAT CGCCGACAAC ATCTTGATGG GCCGTGCGGC TGCGCAGGAC GATGCGGCGC TGCGCGAGGC GCTACGCGCC GCGGACGCCG CGGCGTGGGT CGACCGGTTG CCGGACGGCG CCGCGACGTC GCTGGCGGAG CGCGGTGCGA ATTTGTCCGG CGGCGAGGCG CAGCGGCTCG CGCTGGCGCG CGCAATCTAT GCGGCCGGTC CGCTGCTGCT GTTCGACGAG CCGACCGCGC ATCTCGATGC CGAGGCGCAG CGTGTCGTAT TGCAGGGGCT AGCGCGGCTG CGCATGGGGC GCACCGTGCT GACGATCGCG CATCGGCGCG AGACCATCGC GGCCGCCGAC CGCGTCGTAG TGATCGATCG CGGCCGCGTC GTCGCGCAGG GCACGCCCGC CCAACTCCTG GCCGGCGCGC TCGAGCGATC CGAAGCGGAG CGCACCGATG CGTGA
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Protein sequence | MTARPAESIA LLRSLRPVAG GHARVAAVAA AVGGVLAVAT AQLIAIVVDR LVFGPAALPA VAPLLALLGG VAVLRAAAAW LTERAAFEAS AKVRRHLFRR ALERVSALGP VRLGEHPPGE LVALLTDSLD AVAPLWRAWQ PAIVRAAVVP VAVLAIVAWR DPLAAGILLV ALPLLVWFSI LAGQGAERAS GERWAGLARL GGHLLDQIRG LPERKLAGTA GRAIAAVKDA AERYGRETMA VLRIAFLSAL VVEFVATAAI AGVAIAVGFR LLWGEMDFAT GLFVLLLAPE FFAPLRDIGA RRHAKLEALT ALDKLAPLLD APPAVGRPYI AAGPPAIRFD DVRVVHADGR VALDGFSLDI AAGEHVALVG PSGAGKSTVL ALLLRFVEPS SGRVLIDGAP LSEIDPAAWR RALVAMPQTP QFFEGSIADN ILMGRAAAQD DAALREALRA ADAAAWVDRL PDGAATSLAE RGANLSGGEA QRLALARAIY AAGPLLLFDE PTAHLDAEAQ RVVLQGLARL RMGRTVLTIA HRRETIAAAD RVVVIDRGRV VAQGTPAQLL AGALERSEAE RTDA
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