Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0880 |
Symbol | |
ID | 3909060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1007333 |
End bp | 1008319 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637882773 |
Product | hypothetical protein |
Protein accession | YP_484502 |
Protein GI | 86748006 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.824369 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.406505 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTGA TCAGCCGACA AAGCACCTTC CGCCTCGCCG CGCTCGCACT TTTGACCACG CTGCTGCCGC TCCACGGCGC CGCGGCCGAA GGACTGTATC CCGCGCGCCC CGTCCGCATC GTGGTGCCGT TCGCCGCCGG CGGCGTCGCC GACATCACCG CCCGGCTGGT CGCCGACAAG CTCGGCGCCA AGCTCGGCAG CCGCTTCTAC ATCGAGAACC AGCCCGGCGC CGGCGGCATC AGTGCGGCGC GCACCGTGAT CGCGGCGCAG CCCGACGGCT ACACGCTGGC GCTGCTGTCG AACGGCACCG CGATCAGCGC CTCGCTGTTC AAGAAGCTGC CGTTCGATCC GGTCAAGGAC TTCGCGCCGA TCTCGACTCT CGGCTTCTTC GACTTCCTGT TCACGGTCCG GGCCGATGCG CCCTACAAGA CGATGGAAGA GTTCATCAAG GCGGGCAAGC AGAGCCCGGG CCGATTCAAT GTCGGCACCA TCATTCTCGG CAGCACGCAG AATCTCGCGG CCGGCATGTT CAAGACCGCG GCGGGGATCG ACTTCGTCAC GATTCCGCAT CGTGGCACGC CGGACGTCTT GGTGTCGCTG CTGCAGGGCA ATCTCGACAT GGCGATCGAC AGCTACTCGG CGCTGAAGGG CAGCCTCGCC GACGGCAAGA TCCGCACGCT GGCCGCCTCG GGGCCGCTGC GCTCCAAGAT CACGCCGAAC GTGCCGACGC TGCGCGAAAA CGGACTGGAA GTGAGCATCG AATCCTGGAA CGCGCTGTTC GCGCCGGCCG CGACGCCGCC GGCGGTGATC AGCACGCTGA ACCGCGCGCT GCAGGAGATC CTCGCCGAAC CGGCGCTGAA GAAACAGCTG CTCGACCTCG GCGTCGACGC GCGCGGCTCG ACGCCGGACC AGCTCGCGAC GCGACTGCGC GCCGACATCG AGAAATGGAA GGCCGTGATC GAGACCTCCG GGATCGAGAA ACAATAG
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Protein sequence | MTLISRQSTF RLAALALLTT LLPLHGAAAE GLYPARPVRI VVPFAAGGVA DITARLVADK LGAKLGSRFY IENQPGAGGI SAARTVIAAQ PDGYTLALLS NGTAISASLF KKLPFDPVKD FAPISTLGFF DFLFTVRADA PYKTMEEFIK AGKQSPGRFN VGTIILGSTQ NLAAGMFKTA AGIDFVTIPH RGTPDVLVSL LQGNLDMAID SYSALKGSLA DGKIRTLAAS GPLRSKITPN VPTLRENGLE VSIESWNALF APAATPPAVI STLNRALQEI LAEPALKKQL LDLGVDARGS TPDQLATRLR ADIEKWKAVI ETSGIEKQ
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