Gene RPB_0856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0856 
Symbol 
ID3909114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp980554 
End bp981345 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content69% 
IMG OID637882749 
ProductModE family transcriptional regulator 
Protein accessionYP_484478 
Protein GI86747982 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG2005] N-terminal domain of molybdenum-binding protein
[COG3585] Molybdopterin-binding protein 
TIGRFAM ID[TIGR00637] ModE molybdate transport repressor domain
[TIGR00638] molybdenum-pterin binding domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATCG AGGCTACGGT CACCCTGAAG ACCAAGGACA TTTCCGGCGT CGGCCGCGAC 
CGCATCCGGC TGCTGCAGGC GGTGGCGCGC GAGGGCAGCA TCACCGCCGG CGCCAAGGCG
GCGGGCCTCA GCTACAAGGC GGCGTGGGAC GCGCTCGACG CGATGACCAA CATGTTCGGC
CGCCCGCTGC TGGAAACGCG AACCGGCGGC AAGGCCGGCG GCGGCGCGGT GCTGACGCCG
ACCGGCCTGC GGGTGATCGA GGCGTTCGGC CGGTTGGAGG CCCAGATGGC GCGGGTGTTG
CGCAATCTCG AGCCGGACCT CGCCGGCACC GGCATCTCCC CGCTCAATCT CGTCTCCGGA
TTCTTCATGA AAACCAGCGC CCGCAACGCC CTCCGCGGCA CCATCACCGA AATCAATTCC
GACACGCTGA GCGCAGAGGT CGCGGTCGCG GTGTCGGCCG ACACCACGAT CTACGCGTTG
CTGACCAGCG AGAGCGTGCG CAGCCTGGGT CTCGTGGTCG GGCGCGAGGT GATCGTGCTG
ATCAAGGCGC CGTTCGTGCT GATCTCGCCG GGCGCCACGG CGCCGATGGT GTCGGCGCGC
AATTGCGTGC ACGGCGTGGT CCGGCGCGCC GACGTCTCCG CGGTCAATGC CGAGATCGTG
CTCGATATCG GCGACGACAA GACGCTGGCC GCCTCGATCA CCGCGCGCAG CGCCGTCGAC
ATGAAGCTGT CCCCCGGCGA TCCGGCCTGC GCGTTGTTCG ACGCCGCACA CGTCATCGTC
GCCATCGATT GA
 
Protein sequence
MPIEATVTLK TKDISGVGRD RIRLLQAVAR EGSITAGAKA AGLSYKAAWD ALDAMTNMFG 
RPLLETRTGG KAGGGAVLTP TGLRVIEAFG RLEAQMARVL RNLEPDLAGT GISPLNLVSG
FFMKTSARNA LRGTITEINS DTLSAEVAVA VSADTTIYAL LTSESVRSLG LVVGREVIVL
IKAPFVLISP GATAPMVSAR NCVHGVVRRA DVSAVNAEIV LDIGDDKTLA ASITARSAVD
MKLSPGDPAC ALFDAAHVIV AID