Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0839 |
Symbol | |
ID | 3909097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 953256 |
End bp | 954449 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637882732 |
Product | hypothetical protein |
Protein accession | YP_484461 |
Protein GI | 86747965 |
COG category | [S] Function unknown |
COG ID | [COG4093] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.268531 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGACA TTCCCCCGAC CACCCGCCGC CGGCTGTGGC CGTTGTACCT GATGCCGACG CTGCTGCTGA TCGCCGCGAT CGGCTGGAGC CTGTTCTGGT TCGTCTCTGC GTCGCAGGTC GACCGCATCG TCGACAATTG GCGCGCGCGC GAGGCAGCCG CCGGCCGGGT CTATGAGTGC GGCGACCGCA CCGTCGCCGG CTTCCCGTTC CGGCTCGAAG TGCGCTGCAC CGACGCCAGC GTCGCGCTGA CCTCGCAGAC CGCCGAACAG GTGGCGAGCC GGACGCCGCT GACGGCGAAG CTCGGCGAGA TCCTGGTGGT GGCGCAGATC TACGATCCGC GCCTGTTGAT CGCCGAGTTC AAGGGCCCGG CGAGCTTCGC CGATCGCGGC CGGCCGACCT CGATGGTGCT GAACTGGGCC ACCGCGCGCA GCAGCGTCGC CGGCCTGCCC GGGCCGCCGC AGCGTGTCGC ACTGGTGTTC GATGCGCCGG CGCTCGACCG CGTCGATGGC GCGACGCAGA CGCCGCTGGC CCGCGCCCGC CACGCCGAAA TGCATGCGCG GCAGGTCGAA GGCCCAGCGC CCGATCAGCA GCGGATCGAG ACCGATTTCC GCTTCGAGGG CGCCAGCATT CAGGAGCTGC ATCCGCTGCT CGCCGAGCTG TTCGACGCGA ATCTACGCGT GACGCTGAGC GGGCTGAAGG ATTTTCGCCC CAAGCCGTGG CCGGAGCGCT TCCGCGAATT GCAGGCCGCC GGCGGCCGGA TCGAAATCAC TCAGGCGCGG ATTCAGCAGG GCGGGATGAT CGCGACTGCG ATCGGTGCGC TCGGGCTGAC CCCGGCGGGG AATGTCGACG GCGAATTGCA GATGGTAGTC GCGGGGCTCG ACCAGGTGAT CCCCAAGCTC GGCATCGACA AGGTGCTGGA ACAGGGCGTG TCGCAATCGA CGCTCGATCG CCTCGCGCCG GGCGTGCGCG CCAACGACGT CAACAACGTG CTCGGCGCGC TCGACCGCGC CATCCCCGGC CTCGGCCGTG TGGTGCGCCA GAACGCCAAT GTCGGCGTCG CCGCCGGCAT CAACGCGCTC GGCCAGGAAG CCACCCTCGA AGGCCGCCCC GCCCGCGCCG TCCCGCTGCG CTTCGTCGAC GGCGCCGTGA TGCTCGGCCC GATCAAGGTC GCGCAGATGA AGCCTCTGTT CTGA
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Protein sequence | MTDIPPTTRR RLWPLYLMPT LLLIAAIGWS LFWFVSASQV DRIVDNWRAR EAAAGRVYEC GDRTVAGFPF RLEVRCTDAS VALTSQTAEQ VASRTPLTAK LGEILVVAQI YDPRLLIAEF KGPASFADRG RPTSMVLNWA TARSSVAGLP GPPQRVALVF DAPALDRVDG ATQTPLARAR HAEMHARQVE GPAPDQQRIE TDFRFEGASI QELHPLLAEL FDANLRVTLS GLKDFRPKPW PERFRELQAA GGRIEITQAR IQQGGMIATA IGALGLTPAG NVDGELQMVV AGLDQVIPKL GIDKVLEQGV SQSTLDRLAP GVRANDVNNV LGALDRAIPG LGRVVRQNAN VGVAAGINAL GQEATLEGRP ARAVPLRFVD GAVMLGPIKV AQMKPLF
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