Gene RPB_0837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0837 
Symbol 
ID3909095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp951532 
End bp952341 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content63% 
IMG OID637882730 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_484459 
Protein GI86747963 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.381464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGCA TTTTCGTCCG TTCGTTGATT TTCAACGTGC TGTTCTATCT GCTGCTGGTG 
TTCTGGATTC TGGTCGCGGT GCCGACCTTC GTGCTGCCGC GCCGCGCGCT GATCGGGGTC
GCCAAGCTGT GGGGCCGGAG CAGCATCTGG CTGATGCGTG TCGTCTGCAA CACCAGGGTC
GAATTCCGCG GCCTCGAGAA GATCCCGCAG GGCCCGCTGA TCGTCGCGCC CAAGCATCAG
TCGATGTGGG AGACCTTCGC GTTGCTGCAG TTCTTCGACG CGCCGCTGTA CATCTTGAAG
CGCGAACTGA CCTGGATTCC GTTCTTCGGC TGGTTTCTGA TCAAGGCCGA CATGATCGCG
ATCAACCGCA AGAAGGGCGG ACGCATTCTG ATGGAGATGG CGCGCCGCGC CAGCGAGGAG
GTCAATCGCG GCCGGCAATT GATCATCTTC CCGGAAGGCA CCCGCACCGC GGTCGGCGCG
CCGCCGCACT ACAAGGCCGG CGTCGCCCAG ATCTATGTCG ACTGCGACGT GCCGTGCCTG
CCGGTGGCGC TGAATTCCGG ACTGTTCTGG CCGCGCCGCC AGTTCATGCG CTACCCGGGC
ACGATCGTCG TCGAATTTCT CGATCCCTTG CCGGTCGGCC TGACGCGGCG GGAATTCATC
GACACCGTCA GCGAGCTGAT CGAGACAGCC AGCAACCGGC TGATCGAAGC CGGTCGCAAG
GAGCAGGCCG AGCTGTTCGG TCGGGTGCCG AGCGCGAACG TCCCGGCTGC CGCACCGACA
GTGGCCAAGC GCAATATCGG CAATCAGTAA
 
Protein sequence
MTSIFVRSLI FNVLFYLLLV FWILVAVPTF VLPRRALIGV AKLWGRSSIW LMRVVCNTRV 
EFRGLEKIPQ GPLIVAPKHQ SMWETFALLQ FFDAPLYILK RELTWIPFFG WFLIKADMIA
INRKKGGRIL MEMARRASEE VNRGRQLIIF PEGTRTAVGA PPHYKAGVAQ IYVDCDVPCL
PVALNSGLFW PRRQFMRYPG TIVVEFLDPL PVGLTRREFI DTVSELIETA SNRLIEAGRK
EQAELFGRVP SANVPAAAPT VAKRNIGNQ