Gene RPB_0823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0823 
Symbol 
ID3909638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp938709 
End bp939509 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content67% 
IMG OID637882716 
ProductNAD(P)H dehydrogenase (quinone) 
Protein accessionYP_484445 
Protein GI86747949 
COG category[R] General function prediction only 
COG ID[COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTC TTCTGGTCTT CGCCCATCCC GAACCTCTTT CGCTGAATGG CGCTCTGCGC 
GACGCCGCGG TCGCGGAGCT GCAGCGCCAG GGCCACGAGG TGCGGATCTC GGACCTCTAT
GCCCAGAACT GGAAGCCCGC GATCGACCGC GCCGATTTTC CGAACCTCGC GCCTGACGAG
CGCTTGCTGA CGAGCGCGGC CTCCAAGGCG AGCTTCGACG CCGGAGAGCT GACGCAGGAT
GTCCGCGCCG AGATCGACAA GCTGCTCTGG GCGGATGTCC TGATCCTGCA ATTCCCGCTG
TGGTGGTTCA GTATGCCGGC GATCCTCAAG GGCTGGGTCG ACCGCGTCTA CGCCTGCGGA
TTTGCCTATG GGGTCGGCGA GCACAGCGAC GAGCGATGGG GTGACCGTTA CGGCGAAGGC
AATCTGGCCG GCAAGCGCGC GATGCTGATC GTGACCACCG GCGGCTGGGA ACAGCACTAC
GGCGCCCGCG GCGTCAACGG GCCGATCGAC GACCTGCTGT TTCCGATCCA CCACGGCATT
CTGTTCTACC CGGGCTACGA CGTGCTGCCG CCGTTCGTCG TGTATCAGGC CGGCCGTCTC
GACCAGGCGG GGTTCGAAAT CACCGCCGAG CAGCTGCGCG AGCGGATGCG CACGCTCGCG
ACCACGCCGC CGATTCCCTA CCGGCGCCAG AACGGCGGCG ACTACCTGAT CCCGAGCATG
GAGCTGCGCC CCGGTCTGGG CGCCCCCGGC AGCAGCGGCT TTGCACTCCA CTTGCGGGAC
GAGACGGCGG CCCCGCTGTG A
 
Protein sequence
MKVLLVFAHP EPLSLNGALR DAAVAELQRQ GHEVRISDLY AQNWKPAIDR ADFPNLAPDE 
RLLTSAASKA SFDAGELTQD VRAEIDKLLW ADVLILQFPL WWFSMPAILK GWVDRVYACG
FAYGVGEHSD ERWGDRYGEG NLAGKRAMLI VTTGGWEQHY GARGVNGPID DLLFPIHHGI
LFYPGYDVLP PFVVYQAGRL DQAGFEITAE QLRERMRTLA TTPPIPYRRQ NGGDYLIPSM
ELRPGLGAPG SSGFALHLRD ETAAPL