Gene RPB_0814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0814 
Symbol 
ID3909629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp930834 
End bp931715 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content70% 
IMG OID637882707 
Productglutamyl-Q tRNA(Asp) synthetase 
Protein accessionYP_484436 
Protein GI86747940 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0121184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCAC CCGTTTTCCG ATTCGCCCCG AGCCCGAACG GCTTTCTCCA CCTCGGTCAC 
GCTTATTCCG CGTTGCTGAA TTTCGATTTG GCGCGTGCGA GCGGCGGCCG GCTGCTGCTG
CGGATCGAGG ACATCGATGC CACGCGCTGC CGGCCCGAGT ATGAAGCGGC GATCGTCGAC
GATCTGGCCT GGCTCGGCAT CGCCTGGGAG CCGGAGGTGC GGCGGCAATC CGATCACTTG
GATCTGTATC GCGACGCGGT CGAGCGGCTG GCAGCGCGCG GGCTGGTGTA TCCGGCGTTC
GAGAGTCGCG CCGAGATCGC CCGCCTGGTC GCGGCGAAGG AGACGACGGC GCCATGGCCG
CGTGACCCCG ACGGCGCGCC GCTGTATCCG GGCTCGGCCA AGTTGCTCTC GGCGGAGCAA
CGCGCGCAAC TGATCGGCTC CGGCGCGCCC TATGCGCTGC GGCTCGACAT GGAAGCTGCG
CGGGCGCTCG CCGGCGAGTT GTTCTGGCGC GAGCTTAGTC TCGGCCCCGA CGGTGAGGCC
GGCATGGTCG CGGCCCGGCC CGAAGCCTGG GGCGACGTGG TGATCGCCCG CAAAGAGACG
CCGACCAGCT ATCACCTCGC GGTGGTGATC GACGACGCGC TGCAGGGCGT CACCGAGGTG
GTGCGCGGCG CCGACCTGTT CTGGTCGACC AGCGTCCACC GCCTGCTCCA GACTTTGCTC
GATTTGCCGG CTCCGGTATA TCGGCACCAT CCACTGCTGC GCGATGCCGA GGGGCGCAAG
CTGTCGAAGT CGACCGGCGC CACCGGGCTG CGCGAATTGC GCGCCGCGGG GGGCACGCCG
AGCGAGATCC GCGCGATGGT CGGGCTGGCT GCATCTGCCT GA
 
Protein sequence
MPPPVFRFAP SPNGFLHLGH AYSALLNFDL ARASGGRLLL RIEDIDATRC RPEYEAAIVD 
DLAWLGIAWE PEVRRQSDHL DLYRDAVERL AARGLVYPAF ESRAEIARLV AAKETTAPWP
RDPDGAPLYP GSAKLLSAEQ RAQLIGSGAP YALRLDMEAA RALAGELFWR ELSLGPDGEA
GMVAARPEAW GDVVIARKET PTSYHLAVVI DDALQGVTEV VRGADLFWST SVHRLLQTLL
DLPAPVYRHH PLLRDAEGRK LSKSTGATGL RELRAAGGTP SEIRAMVGLA ASA