Gene RPB_0774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0774 
Symbol 
ID3909262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp867243 
End bp868277 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content66% 
IMG OID637882666 
Producthypothetical protein 
Protein accessionYP_484396 
Protein GI86747900 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.551414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.353288 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCCG CAATCGGCAG GGCGATCGCG TTTCTGCGCG AGAAGCAAAT CCTGCGCAAG 
CTGGGAGTTG CGATCAGCAT CGCGGTCATC GCCGCGGCTT GCTACGTTCT CTTTCACCAG
CTCCGCGGCA TCGACGTCGA CGACGTCCTC GCCGCGATGC AGAAGATCGC GCCGAGTTCG
ATCGTGATGG CCGGGCTGTT CGTCGCCGCG GGCTACTTCA CCCTGACGTT CTACGACCTG
TTCGCGCTGC GGACCATCGG CCGCAACGAC GTCCCCTATC GCACCGCCGC GCTCGCTGCC
TTCACCAGCT ATTCGATCGG CCACAATGTC GGCGCCAGCG TGTTCACCGG TGGCGCGGTG
CGCTACCGGA TCTATTCGGC CTGGAGCCTC GACGGCATCG ACGTCGCCAA GATCTGCTTT
CTCGCCGGCC TGACCTTCTG GCTCGGCAAC GCCGCCGTGC TCGGCATGGG CATCGGCTAT
CATCCGGAAG CGGCGTCCTC GATCAATCAG CTGCCGCCGT GGCTCAATCG CGTGCTGGCG
CTGGCGATCC TGTGCGGGCT GGCGGCCTAT GTGCTGTGGG TATCGGTCAA GCGGCGCCGC
GTCGGCCGCG GCAGCTGGAC CGTCGATCTC CCCGGCGGGC CGCTGACGAT GCTGCAGATC
GGCATCGGCA TCGTCGATCT CGGCTTCTGC GCGCTGGCGA TGTATGTGCT GGTGCCGGAG
GAGCCCAATC TCGGTTTCGT GGTCGTGGCG GTGATCTTCG TCTCCGCCAC GCTGCTCGGC
TTCGCCAGCC ATTCGCCGGG CGGGCTCGGC GTGTTCGATG CCGCGATGCT GGTCGGCCTG
TGGCAGATGA ACAAGGAAGA GCTGCTGGCC GGCATGCTGC TGTTCCGGAT GCTTTACTAC
ATCGTGCCGT TCGTGCTCTC GGTGATCATT CTCGCGGTCC GCGAGATCGT CATCGGCACG
CGCCTCAAAC GGATGGATCG GCTCGCCGCC GCGCTCGATC CGAAGCCGAT CCGACAGGAT
CCCACCCCAG GCTGA
 
Protein sequence
MMAAIGRAIA FLREKQILRK LGVAISIAVI AAACYVLFHQ LRGIDVDDVL AAMQKIAPSS 
IVMAGLFVAA GYFTLTFYDL FALRTIGRND VPYRTAALAA FTSYSIGHNV GASVFTGGAV
RYRIYSAWSL DGIDVAKICF LAGLTFWLGN AAVLGMGIGY HPEAASSINQ LPPWLNRVLA
LAILCGLAAY VLWVSVKRRR VGRGSWTVDL PGGPLTMLQI GIGIVDLGFC ALAMYVLVPE
EPNLGFVVVA VIFVSATLLG FASHSPGGLG VFDAAMLVGL WQMNKEELLA GMLLFRMLYY
IVPFVLSVII LAVREIVIGT RLKRMDRLAA ALDPKPIRQD PTPG