Gene RPB_0711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0711 
Symbol 
ID3908217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp796698 
End bp797876 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content67% 
IMG OID637882603 
Productesterase, PHB depolymerase 
Protein accessionYP_484333 
Protein GI86747837 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3509] Poly(3-hydroxybutyrate) depolymerase 
TIGRFAM ID[TIGR01840] esterase, PHB depolymerase family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.612274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTCACA GAAATCCCAT CGACTTCCTC GCCCATTTGC GAAAGTTCAA CGGTCTCAGT 
GGCTTGCACC CTGCCTCTGG GGCGGCCGAG GCTGCCAGCC CGCTGATCGA GACGGCGGAT
TTCGGCGACA ACCCCGGCAA CCTCCGGATG CTGTCGTTCA TCCCTGAAGG GCTGACGAAG
CGCATCCCGC TGGTGGTCGT GCTGCATGGC TGCACCCAGA ATGCGGCCGG TTACGATGTC
GGCGCAGGAT GGTCGACGCT AGCGCAGCGC TACGGCTTCG CCCTGCTGAT GCCGGAGCAG
AAGCGGGACA ATAACCCCAA TCTTTGCTTC AACTGGTTCG TGCCGGACGA CATCAAGCGC
GGCCACGGCG AAGTCGCGTC GATCTGGCAG ATGGTCGAGC GAATGTCGGC TGCCTATCAC
ATCGATCGGG CGCGAATTTT CGTGACCGGA CTATCCGCCG GCGGCGCGAT GACCACGGTG
ATGCTGGCGA CCTATCCGGA TGTGTTCGCC GGCGGTGCGG TGATCGCCGG GCTGCCCTAT
GGAGTCGCCG GCACCGTACG GCAGGCGCTG AAGGAGATGC GGCATCCATC GCCGCGTTCC
GCGCACGAGC TCGGCGATCT GGTGCGCAAG GCGTCGCCGC ACAAGGGGCC ATGGCCGAAG
CTGTCGGTCT GGCACGGCAG CGCCGATCGC ACCGTGAACG CCGCCAATGC CGATGCGCTG
GTGAAGCAGT GGCTCGATCT GCACGGTCTG CCGGAAACGC CGATGTCCCA GCGGAGTGTC
GTCGGCTTTC CTCACCAGGT CTGGTGGAAC TCCAGCGGCG AGGCGACCGT GGAATCCTAC
ACCATCACCG ACATGGCGCA CGGCACGCCG ATCGGCCGCG CCAATGACGA GCGCTACGGC
GTCGCCGGCG CCTACCTGCT CGAAGCGGGA ATTTCGTCAT CGTTCCACAT CGCCGAATTC
TTCGGGCTCA CCGGCCGTAT TCACCGGCAC AAGGCGGTCG CGCGACCGAG CGCCGAAGCG
GACCACGCCG CGGCCGCGGA CGGCGCGCGA GCGGGAACCT TCAGGCCGCG TGCGGCCGCC
GGCGCGCGGG CGGCCCACGA GCCGCCCCGT GACCGCCGCG GCTTCGATGT CGGCGCGGTG
ATCACCCGGG CGCTGACTGC GGCCGGCCTG ATGAAGTAG
 
Protein sequence
MSHRNPIDFL AHLRKFNGLS GLHPASGAAE AASPLIETAD FGDNPGNLRM LSFIPEGLTK 
RIPLVVVLHG CTQNAAGYDV GAGWSTLAQR YGFALLMPEQ KRDNNPNLCF NWFVPDDIKR
GHGEVASIWQ MVERMSAAYH IDRARIFVTG LSAGGAMTTV MLATYPDVFA GGAVIAGLPY
GVAGTVRQAL KEMRHPSPRS AHELGDLVRK ASPHKGPWPK LSVWHGSADR TVNAANADAL
VKQWLDLHGL PETPMSQRSV VGFPHQVWWN SSGEATVESY TITDMAHGTP IGRANDERYG
VAGAYLLEAG ISSSFHIAEF FGLTGRIHRH KAVARPSAEA DHAAAADGAR AGTFRPRAAA
GARAAHEPPR DRRGFDVGAV ITRALTAAGL MK