Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0711 |
Symbol | |
ID | 3908217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 796698 |
End bp | 797876 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637882603 |
Product | esterase, PHB depolymerase |
Protein accession | YP_484333 |
Protein GI | 86747837 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
TIGRFAM ID | [TIGR01840] esterase, PHB depolymerase family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.612274 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTCACA GAAATCCCAT CGACTTCCTC GCCCATTTGC GAAAGTTCAA CGGTCTCAGT GGCTTGCACC CTGCCTCTGG GGCGGCCGAG GCTGCCAGCC CGCTGATCGA GACGGCGGAT TTCGGCGACA ACCCCGGCAA CCTCCGGATG CTGTCGTTCA TCCCTGAAGG GCTGACGAAG CGCATCCCGC TGGTGGTCGT GCTGCATGGC TGCACCCAGA ATGCGGCCGG TTACGATGTC GGCGCAGGAT GGTCGACGCT AGCGCAGCGC TACGGCTTCG CCCTGCTGAT GCCGGAGCAG AAGCGGGACA ATAACCCCAA TCTTTGCTTC AACTGGTTCG TGCCGGACGA CATCAAGCGC GGCCACGGCG AAGTCGCGTC GATCTGGCAG ATGGTCGAGC GAATGTCGGC TGCCTATCAC ATCGATCGGG CGCGAATTTT CGTGACCGGA CTATCCGCCG GCGGCGCGAT GACCACGGTG ATGCTGGCGA CCTATCCGGA TGTGTTCGCC GGCGGTGCGG TGATCGCCGG GCTGCCCTAT GGAGTCGCCG GCACCGTACG GCAGGCGCTG AAGGAGATGC GGCATCCATC GCCGCGTTCC GCGCACGAGC TCGGCGATCT GGTGCGCAAG GCGTCGCCGC ACAAGGGGCC ATGGCCGAAG CTGTCGGTCT GGCACGGCAG CGCCGATCGC ACCGTGAACG CCGCCAATGC CGATGCGCTG GTGAAGCAGT GGCTCGATCT GCACGGTCTG CCGGAAACGC CGATGTCCCA GCGGAGTGTC GTCGGCTTTC CTCACCAGGT CTGGTGGAAC TCCAGCGGCG AGGCGACCGT GGAATCCTAC ACCATCACCG ACATGGCGCA CGGCACGCCG ATCGGCCGCG CCAATGACGA GCGCTACGGC GTCGCCGGCG CCTACCTGCT CGAAGCGGGA ATTTCGTCAT CGTTCCACAT CGCCGAATTC TTCGGGCTCA CCGGCCGTAT TCACCGGCAC AAGGCGGTCG CGCGACCGAG CGCCGAAGCG GACCACGCCG CGGCCGCGGA CGGCGCGCGA GCGGGAACCT TCAGGCCGCG TGCGGCCGCC GGCGCGCGGG CGGCCCACGA GCCGCCCCGT GACCGCCGCG GCTTCGATGT CGGCGCGGTG ATCACCCGGG CGCTGACTGC GGCCGGCCTG ATGAAGTAG
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Protein sequence | MSHRNPIDFL AHLRKFNGLS GLHPASGAAE AASPLIETAD FGDNPGNLRM LSFIPEGLTK RIPLVVVLHG CTQNAAGYDV GAGWSTLAQR YGFALLMPEQ KRDNNPNLCF NWFVPDDIKR GHGEVASIWQ MVERMSAAYH IDRARIFVTG LSAGGAMTTV MLATYPDVFA GGAVIAGLPY GVAGTVRQAL KEMRHPSPRS AHELGDLVRK ASPHKGPWPK LSVWHGSADR TVNAANADAL VKQWLDLHGL PETPMSQRSV VGFPHQVWWN SSGEATVESY TITDMAHGTP IGRANDERYG VAGAYLLEAG ISSSFHIAEF FGLTGRIHRH KAVARPSAEA DHAAAADGAR AGTFRPRAAA GARAAHEPPR DRRGFDVGAV ITRALTAAGL MK
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