Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0706 |
Symbol | |
ID | 3908212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 793260 |
End bp | 794381 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637882598 |
Product | hypothetical protein |
Protein accession | YP_484328 |
Protein GI | 86747832 |
COG category | [S] Function unknown |
COG ID | [COG1289] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCGT TCTGGTCTCG ATATCCTGCA TATCTGCGCC CGCGCCGGCC GCAATGGGGG CTGGCGCTGC GCGTCACGAT CGGTGCGCTG CTGGCGCTGG CGGCCGCGCA GGCGCTGCAT CTGCGGCTGC CGCTGTGGGC GGTGCTGACC GCGATCATCG TCACCCAGCT CAGCGTCGGC CGCTCGGTCA AGATCGCGTT CGACTATCTG GTCGGCACCA TCGGCGGCGC GATCTATGGC GGCGCCATCA CCATTCTGGT GCCGCATCAC AGCGAACTGG CGTTGCTCGG GGTGCTGGCG CTGGCGGTGG CGCCGCTGGC CCTGCTGGCG GCGGTCAAGC CGAGCCTCAA CGTCGCCACC GTCACGGCGA TCATCGTGCT GCTGGTGCCG ACCATGACGC CGGTGGCGCC GTTGGATTCG GCGATCGACC GGGTGCTGGA AGTCGCGGTC GGATCGCTGT CCGGGCTGCT GGTGTCGTTC TTCGTGCTGC CGTCTCGGGC GCAGGCGCTG GCGCTCGCCG CAGCGGCACG GGCGCTCGAT CTGATGGCGG TGGCGCTCGG CGAATTGCTC GCCGGCCTCA CCCGCGGCCT CGACAACGAT GCGCTGCACC GGTTGCAGGA CGGCATCGGC GCCTCGCTGG TGACGCTCAA CGAGATCGGC GACGAGGCCG AGCACGAGCG CGCCACCGGG CTGTCGCGCG GGCCGGATAT CGGGCCGCTG ATCCGCACGC TGCTCAGGTT GCGGCACGAT CTGGTGATGG TCGGCCGCGC CGTCGCGGCG CCGCTGCCGC GGGCCTTGCA GGACCGCCTC GGCCCGTCGC TGGAGTCGTT TCGTGCCGCC GCGACCCTGC ATCTGGCCGC GAGCGCCGCG GCGTTGCGCG ATCGCGGCCC GCCGCCGCCG CTGCGCGCGG TGATTGCGGC GCTCGACGCC TATGCGGCCG AAATCGCAAA GGTGCGCGGC GACGGGCTGA CGCGCGAATT CTCCGGCGAG CAGGCCGAGC GGTTCTTCGC GCTCGGCTTC GCACTGGAAC AGCTCAGCCA GAATTTCCGT GATCTCGAAA TGCGGGTCAC CGAATGGGCC CGGCCCGGCG CGGCCGTCGC CGACACCCCG CCGGTCTCCT GA
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Protein sequence | MKPFWSRYPA YLRPRRPQWG LALRVTIGAL LALAAAQALH LRLPLWAVLT AIIVTQLSVG RSVKIAFDYL VGTIGGAIYG GAITILVPHH SELALLGVLA LAVAPLALLA AVKPSLNVAT VTAIIVLLVP TMTPVAPLDS AIDRVLEVAV GSLSGLLVSF FVLPSRAQAL ALAAAARALD LMAVALGELL AGLTRGLDND ALHRLQDGIG ASLVTLNEIG DEAEHERATG LSRGPDIGPL IRTLLRLRHD LVMVGRAVAA PLPRALQDRL GPSLESFRAA ATLHLAASAA ALRDRGPPPP LRAVIAALDA YAAEIAKVRG DGLTREFSGE QAERFFALGF ALEQLSQNFR DLEMRVTEWA RPGAAVADTP PVS
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