Gene RPB_0702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0702 
Symbol 
ID3908208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp788071 
End bp788988 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content69% 
IMG OID637882594 
Productphosphoribosylaminoimidazole-succinocarboxamide synthase 
Protein accessionYP_484324 
Protein GI86747828 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase 
TIGRFAM ID[TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGA TGCTCTCGAG CGACCTGCCG CTGCCGAAGA TCGGCCGCGG CAAGGTGCGC 
GACATCTATG CCGTCGACGC CGACCGGCTG CTGCTGGTGA CCACCGACCG GATCAGCGCC
TTCGACGTGG TGATGGCCGA GACCATCCCG ATGAAGGGCG CGGTGCTGAC GCAGATCAGC
GCCTGGTGGT TCGACCAGCT CGGCGGCGTG GTGCCGCACC ACATGATCAG CGCCGACACC
GCCGAGATCG TCGACGCCGT GCCGGCGCTG CAGGATCATC GCGCGACCCT CGCCGGCCGG
ACCATGCTGT GCCGGCGCAC CACCGTGTTT CCGGTCGAAT GCGTCATCCG CGGCTACATC
ACCGGTTCGG CCTGGAAGGA ATACGCCGCG ACCGGCACGC TGGCCGGCGA GCCGCTGCCC
GAGGGCCTGC AGGAAAGCGA GCATCTTCCC GCGCCGATCT TCTCGCCGGC GACCAAGGCC
GAGACCGGCC ATGACGAGAA CATCACCATC GCCCGAATGC GCGCCATCGT CGGCGACGAA
GACGCCTATA CGCTGGAGAG CATGACGCGC GCGGTCTACA CCCAAGGCGA GGCGATCGCC
CGCGAGCAGG GCATCATCAT CGCCGACACC AAATTCGAAT TCGGCCGCGA CGCCGACGGC
CGGATCATTC TGATCGACGA GGTGATGACG CCGGATTCGT CGCGGTTCTG GGCCGCCGAC
GCCTACCAGC CGGGCCGGCC GCAGCCGTCT TTCGACAAGC AGCCGCTGCG CGACCATCTC
GACGCCGAGC GCCGCGCCGG CCGCTGGAAC GGCGAAGCGC CGCCGCCGAA ACTGCCCGAC
GTGGTGGTCG CTGCAACCAG CGCGCGCTAT CTCGACGCCT ATCGCCGGCT GACGGGCGCC
GATCTCGCGA TCTCCTGA
 
Protein sequence
MTTMLSSDLP LPKIGRGKVR DIYAVDADRL LLVTTDRISA FDVVMAETIP MKGAVLTQIS 
AWWFDQLGGV VPHHMISADT AEIVDAVPAL QDHRATLAGR TMLCRRTTVF PVECVIRGYI
TGSAWKEYAA TGTLAGEPLP EGLQESEHLP APIFSPATKA ETGHDENITI ARMRAIVGDE
DAYTLESMTR AVYTQGEAIA REQGIIIADT KFEFGRDADG RIILIDEVMT PDSSRFWAAD
AYQPGRPQPS FDKQPLRDHL DAERRAGRWN GEAPPPKLPD VVVAATSARY LDAYRRLTGA
DLAIS