| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0675 |
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| Symbol | truA |
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| ID | 3908602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 759551 |
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| End bp | 760288 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637882566 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_484297 |
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| Protein GI | 86747801 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCCGCT ACAAACTCAC CATCGAATAT GACGGCGCGC CGTTTTGCGG CTGGCAGTTG
CAGCCGACGT TGCCGTCGGT GCAGGGCGCG CTGGAGGCGG CGGCGCTGGC GACCTGCGGC
GAAGCGGTGC GGGTGCACGG CGCCGGCCGC ACCGATGCGG GCGTGCACGC GCTGGGGCAG
GTGGCGCATG TCGACATTCC GAAGCCGTTC CGCGCCGACA AGCTGCGCGA CGCGCTCAAC
GCCCATGTGC GGCCGCATCC GATCGCGGTC CTGTCCGCCG AACTCGTGGC GGATGATTTC
GAGGCGCGGT TCTCGGCGAT CCGGCGGCAC TACCGCTATC GCATCGTCAA CCGCCGCTCC
AATCTCGCGC TCGAGCTCGG CAAAGTGTGG CGGGTGCCGA AGCCACTCGA CACCGACGCG
ATGCACCGCG CAGCGCAAGT GCTGATCGGC AAGCACGACT TCACGACGTT CCGCGACACC
GAGTGCCAGG CCGCCTCGCC GGCCAAGACG CTGGACGTGC TCGACGTCGT GCGGAACGGC
GACGCCGTCG ATATCATCAC CAATGCGCGT TCCTATCTGC ACAGCCAGGT GCGCTCGATG
GTCGGCTCCC TGGTGTGGGT CGGCGAAGGC CGCTGGACGG CGGATGATCT CGCCGCCGCG
CTCGCCGCCC GCCGCCGCTC CGCCTGCGGC CCGGTGGCGC CGCCGGATGG GTTGTATCTG
GTGCAGGTGG ATTACTGA
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| Protein sequence | MPRYKLTIEY DGAPFCGWQL QPTLPSVQGA LEAAALATCG EAVRVHGAGR TDAGVHALGQ
VAHVDIPKPF RADKLRDALN AHVRPHPIAV LSAELVADDF EARFSAIRRH YRYRIVNRRS
NLALELGKVW RVPKPLDTDA MHRAAQVLIG KHDFTTFRDT ECQAASPAKT LDVLDVVRNG
DAVDIITNAR SYLHSQVRSM VGSLVWVGEG RWTADDLAAA LAARRRSACG PVAPPDGLYL
VQVDY
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