Gene RPB_0661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0661 
Symbol 
ID3908588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp745558 
End bp746364 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content63% 
IMG OID637882552 
Productundecaprenyl pyrophosphate phosphatase 
Protein accessionYP_484283 
Protein GI86747787 
COG category[V] Defense mechanisms 
COG ID[COG1968] Uncharacterized bacitracin resistance protein 
TIGRFAM ID[TIGR00753] undecaprenyl-diphosphatase UppP 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.171076 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTCCG ATATCATCAG AGCCGTGATT CTCGGCGTGG TCGAGGGTGT CACCGAGTTC 
CTGCCGGTCT CATCGACCGG CCATCTGCTG CTGGTGGGGC GATTCTTCAA TCTCGGCGAG
GGCGATTTCT GGAAGACCTT CGACGTCCTG ATCCAGCTCG GCGCGATCCT CGCGATCCTC
GCGCTTTATT TCGCCAAATT GTGGCGAATT GCGCTCGGGA TGTTCTCGGA TCCGGCGGCG
CAGCGTTTCA TCATCGGCGT GCTGGTCGCG TTCCTGCCGG CGGCGGTGAT CGGCGCTGCG
GCGGGATCCT ACATCAAGCT GTTTCTGTTC AACCCCTGGG TGGTGTGCTT CTCGCTGATC
GTCGGCGGCG CCGTCTTGCT GTGGGTCGAT CAGCTCGACC TGAAGCCGCG CCACCATGAT
GCCACGACGT TCCCGGTGCT GATGTATTTC TACATCGGAT GCGCGCAATG CGTGGCGATG
ATCCCCGGCG TGTCACGCTC CGGCGCCAGC ATCGTGGCGG CGATGCTGTT CGGCGCCGAC
AAGCGCGCCG CCGCCGAGTT CTCGTTCTTT CTGGCGATCC CGACCATGGT CGGCGCCTTC
GTGTACGACC TCTACAAGAG CCGCGCCGAT CTGACGACCG ACCACATGAC CATCGTGGCG
GTCGGCTTCG TGGTGTCGTT CATTACCGCG ATCATCGTGG TGAAGACCTT CCTCGGCTAC
GTCACCCGTC ACGGCTTCCA GCTGTTCGCG TGGTGGCGCG TCGTCGTCGG CACGCTCGGC
CTGATCGCGC TGGCGATGGG CCGCTGA
 
Protein sequence
MLSDIIRAVI LGVVEGVTEF LPVSSTGHLL LVGRFFNLGE GDFWKTFDVL IQLGAILAIL 
ALYFAKLWRI ALGMFSDPAA QRFIIGVLVA FLPAAVIGAA AGSYIKLFLF NPWVVCFSLI
VGGAVLLWVD QLDLKPRHHD ATTFPVLMYF YIGCAQCVAM IPGVSRSGAS IVAAMLFGAD
KRAAAEFSFF LAIPTMVGAF VYDLYKSRAD LTTDHMTIVA VGFVVSFITA IIVVKTFLGY
VTRHGFQLFA WWRVVVGTLG LIALAMGR