Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0659 |
Symbol | |
ID | 3908585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 743528 |
End bp | 744142 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637882549 |
Product | 3'-5' exonuclease |
Protein accession | YP_484281 |
Protein GI | 86747785 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.265112 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATCC GCCTGCATCG CGGCGATCTG CCGGATCTCA CCCGCTACAA TGATTCCGTG GCGATCGACA CCGAGACGAT GGGGCTGCAT CCGCATCGCG ACCGATTGTG CGTGGTGCAA TTATCGAACG GCGACGGCAG CGCTGACGTG GTGCAGATCC CGCAGGGGCA CAGCGATGCG CCGAACCTGA AGAAGCTGCT CGGCGACCCG AATATCTTGA AGATCTTCCA CTTCGCGCGG TTCGATCTCG CCGCGCTCTC CAATGCGCTC GGGGTGATGC CGCAACCGGT GTACTGCACC AAAATCGCCT CGCGGCTGAC CCGGACCTAC ACCGACCGGC ACGGCCTGAA GGACCTGGTG CGCGAGCTGC TCAACGTCGA TCTGTCGAAG CAGCAGCAAT CCAGCGACTG GGGCGCCGAC ACGCTGAGCG ACGCCCAGCT CGCTTACGCC GCCTCCGACG TGCTTCATCT CCACGCGCTG CGCGACAAGC TCGACGCCAT GCTGGCGCGG GAGAACCGAA CCGAGCTGGC GCAGGCCTGC TTCGGATTCC TGCCGCACCG CGCCCGACTC GACCTCGGCG GCTGGAGCGA AGAGGACATC TTCGCGCATT CCTGA
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Protein sequence | MTIRLHRGDL PDLTRYNDSV AIDTETMGLH PHRDRLCVVQ LSNGDGSADV VQIPQGHSDA PNLKKLLGDP NILKIFHFAR FDLAALSNAL GVMPQPVYCT KIASRLTRTY TDRHGLKDLV RELLNVDLSK QQQSSDWGAD TLSDAQLAYA ASDVLHLHAL RDKLDAMLAR ENRTELAQAC FGFLPHRARL DLGGWSEEDI FAHS
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