Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0658 |
Symbol | |
ID | 3908584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 742518 |
End bp | 743249 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637882548 |
Product | hypothetical protein |
Protein accession | YP_484280 |
Protein GI | 86747784 |
COG category | [S] Function unknown |
COG ID | [COG5375] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.27994 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGTGC GCTTCGCGGC AGCGGCGCGC CATAGCCGGC TGGTGCGGAC GCTGCGGATC GCTGTGCCGC TGGTGGTGGC GCTGTCGATG GCCGCGATCA TTGCGATCTC GCTGTTCAAC CCGTTTCGCC TGCTGTCGAA ACTACCGCTC GAGGTCGGCG ATCTGGTGGT GTCGGGAACC AAGATTACAA TGGAATCGCC GCATATGGCC GGCTTCACCG ACGACGGCCG GCCCTACGAG ATGTGGGCGC GGTCGGCGAC GCAGGATCTG ACCAGCCAGG ACCATGTCGA CCTGCATACG CTGCGGGCCA AGGTCGTCAG CGACGATCAA TCCACCGTGC TGATCGAGGC GCGCGACGGC AAATTCAACA CCAAGGCGCA ACTCCTGAAT CTGCAGAAGG ACGTCTATCT GCGCACCTCG ACCGGCAGCG AGGCCTGGAT GACCCAGGCC GACATCGACA TGAGCAAGGG CACCGTGGCG TCCGACGAGC CGGTCGACGT CAAATGGCTC GGCGGCACGT TGCGCGGCCA GCGGCTGCGG ATTACCGAGA AAGGCGACGT GATCCGATTC GAGGGCGGAG TGGTGATGAA CCTGGACAAC ACCGCCATGC CGGCATCTGC CGAGGCGGCC GCGGCGCAGC CGACGCCGGC CTCGGCGCCG AAGGCCGATC CGGCGGCGAA AGCCAAACCA TCGCCGGCCA CCCCGCGCCA GCGCGACGCG AATCGCCCAT GA
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Protein sequence | MEVRFAAAAR HSRLVRTLRI AVPLVVALSM AAIIAISLFN PFRLLSKLPL EVGDLVVSGT KITMESPHMA GFTDDGRPYE MWARSATQDL TSQDHVDLHT LRAKVVSDDQ STVLIEARDG KFNTKAQLLN LQKDVYLRTS TGSEAWMTQA DIDMSKGTVA SDEPVDVKWL GGTLRGQRLR ITEKGDVIRF EGGVVMNLDN TAMPASAEAA AAQPTPASAP KADPAAKAKP SPATPRQRDA NRP
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