| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0640 |
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| Symbol | rpsA |
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| ID | 3908333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 724493 |
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| End bp | 726190 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637882529 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_484262 |
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| Protein GI | 86747766 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.079846 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTCGA CTGATACTTA CAATCCGACC CGCGACGATT TCGCCGCGAT GCTCGACGAG
TCCTTTGCGG GCGGCAATCT GCAGGAAAGC TCCGTCATCA AGGGCATCGT CGTCGCGATC
GAAAAGGACA TGGCCGTCAT CGATGTCGGC CTGAAGACCG AAGGCCGCGT GGCGCTGCGT
GAATTCGCAG GACCCGGCCG TGACAGCGAA TTGAAGGTCG GCGACACCGT CGAAGTGTTC
CTCGACCGGA TCGAGAATGC GCTCGGCGAA GCCGTTCTGT CGCGCGACAA GGCGCGCCGC
GAAGAGAGCT GGGGCAAGCT CGAGAAGGCC TTCCAGGGCA ACGAGAAGGT GTTCGGCGTC
ATCTTCAACC AGGTCAAGGG CGGCTTCACG GTCGACCTCG ACGGCGCCGT GGCGTTCCTG
CCGCGCAGCC AAGTCGACAT CCGTCCGATC CGCGACGTCG CGCCGCTGAT GAACAACTCG
CAGCCGTTCC AGATTCTGAA GATGGACCGC CGCCGCGGCA ACATCGTGGT GTCGCGCCGC
ACGGTTCTCG AAGAGACCCG CGCCGAGCAG CGCCAGGAGC TGGTGCAGAA CCTCGAAGAG
GGTCAGGTGA TCGACGGCGT GGTCAAGAAC ATCACCGATT ACGGTGCGTT CGTCGACCTC
GGCGGCATCG ACGGCCTGCT GCACGTGACC GACATCGCCT GGCGCCGGGT CAACCACCCG
ACCGAAGTGC TGACGATCGG CCAGACCGTC AAGGTCAAGA TCATCAAGAT CAACCACGAG
ACCCACCGCA TTTCGCTCGG CATGAAGCAG CTGCTGGACG ATCCGTGGCA GGGCATCGAG
GCGAAGTACC CGCTGAACGC GCGCTTCACC GGCCGCGTCA CCAACATCAC CGACTACGGC
GCGTTCGTCG AGCTCGAGCC GGGCATCGAA GGCCTGATCC ACGTCTCCGA GATGTCGTGG
ACCAAAAAGA ACATGCACCC CGGCAAGATC GTGTCGACTT CGCAGGAAGT CGAAGTGCAG
GTGCTCGAAG TGGATTCGGT CAAGCGCCGG ATTTCGCTCG GCCTCAAGCA GACGATGCGC
AACCCGTGGG AAGTGTTCGT CGAGAAGTAT CCGGTCGGCT CGACCGTCGA AGGCGAAGTC
AAGAACAAGA CCGAGTTCGG CCTGTTCCTC GGCCTCGACG GCGACGTCGA CGGCATGGTG
CATCTCTCCG ACCTCGACTG GAAGCAGCCG GGCGAGCAGG TGATCGACAA CTTCAAGAAG
GGCGACATGG TCAAGGCCAT CGTCCTCGAC GTCGATGTCG AGAAGGAGCG CATCTCGCTC
GGCGTCAAGC AGCTCGAAGG CGACCCCTTC GCCGAGCCGG GCGACGTCAA GAAGGGCGCG
ATCGTGACCT GCGAAGTGCT GGACGTGAAG GAATCGGGCA TCGACGTACA GATCGTCGGC
ACCGACTTCG CCACCTTCAT CAAGCGCTCG GAGCTGGCCC GCGATCGCAA CGACCAGCGC
GCCGAACGCT TCGCGGTCGG TGAGAAGGTC GACGCCCGCG TCATCCAGTT CGACAAGAAG
GCCCGCAAGG TCCAGGTGTC GATCAAGGCG CTGGAAGTCG CGGAAGAGAA GGAAGCCATC
GCACAGTACG GCTCGTCCGA TTCGGGCGCG ACGCTGGGCG ACATTCTCGG CACCGCGCTC
AAGCAGCGCG ACAAGTAA
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| Protein sequence | MASTDTYNPT RDDFAAMLDE SFAGGNLQES SVIKGIVVAI EKDMAVIDVG LKTEGRVALR
EFAGPGRDSE LKVGDTVEVF LDRIENALGE AVLSRDKARR EESWGKLEKA FQGNEKVFGV
IFNQVKGGFT VDLDGAVAFL PRSQVDIRPI RDVAPLMNNS QPFQILKMDR RRGNIVVSRR
TVLEETRAEQ RQELVQNLEE GQVIDGVVKN ITDYGAFVDL GGIDGLLHVT DIAWRRVNHP
TEVLTIGQTV KVKIIKINHE THRISLGMKQ LLDDPWQGIE AKYPLNARFT GRVTNITDYG
AFVELEPGIE GLIHVSEMSW TKKNMHPGKI VSTSQEVEVQ VLEVDSVKRR ISLGLKQTMR
NPWEVFVEKY PVGSTVEGEV KNKTEFGLFL GLDGDVDGMV HLSDLDWKQP GEQVIDNFKK
GDMVKAIVLD VDVEKERISL GVKQLEGDPF AEPGDVKKGA IVTCEVLDVK ESGIDVQIVG
TDFATFIKRS ELARDRNDQR AERFAVGEKV DARVIQFDKK ARKVQVSIKA LEVAEEKEAI
AQYGSSDSGA TLGDILGTAL KQRDK
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