| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0628 |
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| Symbol | |
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| ID | 3908321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 709131 |
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| End bp | 712277 |
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| Gene Length | 3147 bp |
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| Protein Length | 1048 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637882517 |
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| Product | hypothetical protein |
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| Protein accession | YP_484250 |
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| Protein GI | 86747754 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3893] Inactivated superfamily I helicase |
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| TIGRFAM ID | [TIGR02786] double-strand break repair protein AddB, alphaproteobacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.397412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.357504 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTTT TCAGTGTCCC GCCCTCCGCG CCGTTTCTGC GCACGACGAT CGAAGCGCTG
GTCGATGGTC GACTGATCGA GGGCTTCGAC GCGCGGGCCA AGCCCGAGCG CCTCGCCGAG
GCGACGCTGT ATCTGCCCAC GCGTCGCGCC GGCCGCCTCG CGCGCGACAT CTTTCTCGAC
GTGCTCGGCA CCGACGCGGT GCTGCTGCCG CGAATCGTTC CGCTCGGCGA TGTCGACGAA
GACGAACTGG CGTTCGCGCA GGCCGCGACC GGCGCGGCCG ATCTCGACAT TCCGCCGGCG
CTCGACGGAC TGCCGCGGCG CCTGCTGCTG GCGCAACTGA TCGCCGCCTG GGCCAAGGGC
CTGCGGCCCG GCGATCCGCA GCAATCGCCG CTGGTGGTCG GCGGCCCGGC CTCGACATTG
GCGCTGGCGG ACGACCTGGC GCGGCTGATC GACGACATGG CGACGCGCGG CGTCGACTGG
GCCGCGCTCG ACATGCTGGT GCCGGATGCG TTCGACCGTT ACTGGCGGCT GACGCTGGAT
TTTCTCAAGA TCGCCGGGCA GTGGTGGCCG CTGCATCTGC GCGAGACCGA CCGCATCGAA
CCGGCGGCGC GGCGCGATCT GTTGATCGAG GCCGAAGCGG CGCGGCTCGC GGCGCATCGC
GGCGGCCCGG TGATCGCGGC GGGCTCGACC GGCTCGATGC CGGCGACCGC GCGCCTCCTG
CACGCCATCG CCCAATTGCC GCACGGCGCC GTGGTGCTGC CCGGCCTCGA CACCGAACTC
GACGAAGCCG CGTGGCAGAT GATCGGCGCC GTGCACGACA AGCAGGGCAA GCTGATTTCG
CCGCCGTCGC CGAACCATCC GCAATTCGCG ATGCACGGCC TGCTGGCGCG GATGGGGTTG
GAACGACGCG ACGTCCTTCG CCTTGGCGAA GGCGAGCGTC ACGGCCGCGA GGTGCTGGCC
TCCGAGATGA TGCGGCCGTC ATCGGCGACG GCCGCGTGGC ACGACCGGCT CGCCGATCCT
GCTATCGACC AACTGATTGG CGACGGCACC CATGGCCTGA CGCTGATCGA GGCGCCGAAC
TCCGAGATCG AGGCGCTGAC GATTGCGGTC GTGTTGCGCG AGGCACGCGA GCGTGGCCAA
TCCGCCGCGC TGGTGACGCC GGACCGCGCG CTGGCGCGCC GCGTCGTCGC CGCGCTCGGC
CGCTGGAAGC TGCCGGTCGA CGATTCCGGC GGCGATTCGC TGATGGATAC CCAGGCCGGC
ATCTTCGCCC GGCTCGCCGC CGAGACGGCG TTGCACGGCT GCGAGCCGGC GACATTGCTC
GCTTTGTTGA AACATCCGCT GCTGCGGCTC GGCCGCGCCG CTTATGGCTG GCGGTCTGCG
ATCGAAACGC TCGAGCTGGC GCTGCTGCGC GGCACGCGGC CGGCGGCGGG TACCGAGGGA
CTGGCGAAGG AGTTCGCGCG CTATCGCGCC GAGCTGACCA AGTTGAATAG TGGCGAACTC
AGTGCGCTGC ATCGCGCCGA GCCGCGCGCC CGGCTCGGCG ACGAGGCGCT CGACGAAGCT
CACGCGCTGA TCGTGGCGTT GCGTGCCGCG CTGGCGCCGC TGGAGAGCGT CGGCGTCGAG
CCGATCGATC TGTGTGCCTT CGGGCAGCGT CATCGCGCCG TGTTGATCGC GCTATCGATA
GATCACGACG ACAATGCCGT CGCGTTTGAA GGGCCGCAAG GATCGGCGCT GCTGAAGGCG
TTCGACGATC TGGCGGAAGT CGAGCCGCTC AGCGGCGTAA TGGTGCCGCC GCATGACTAT
CCCGAATTGT TCGAGACCGC CTTCAGCGAC CGGATCGTGC GCCGGCCCGA ACTCGCCGGC
GCGGCGCTGC GGATCTACGG CCCGCTCGAA GCGCGGCTGA CGCAGCACGA TCGCGTCGTC
CTCGGCGGCC TCGTCGAAGG CGTCTGGCCG CCGGCGCCGC GGATCGATCC GTGGCTGTCG
CGGCCGATGC GCCACGAGCT CGGGCTCGAT CTGCCCGAGC GCCGGATCGG CCTGTCGGCG
CACGACTTCG CGCAACTACT CGGCGCGAAT GAAGTGATCC TCAGCCACGC CGCCAAGGTC
GGCGGCGCGC CGGCGGTGGC GTCGCGGTTT CTGCACCGGC TCGAAGCGGT CGCCGGCAAG
GCGCGCTGGA GCGACATCAA GGCGCGCGGA GCGACTTATC TGGACTACGC GCTGGCGCTG
GATCGGCCCG ACCAGGTGAC GCCGATCGCC CAGCCGGCGC CGAAGCCGCC GCGCGAGGCC
CGGCCGCTGA AGCTGTCGGT CACCGCGATC GAGGACTGGC TGCGCGATCC CTACACGATC
TACGCCAAGT TCATTCTCGG CCTGTCGGCG CTCGACCCGG TCGACATGCC GTTGTCGGCG
GCGAATCGCG GCTCGGCGAT CCACGAGGCG CTCGGCGACT TCACCGAGCG TTTCCCCGAT
GCGCTGCCCG ACGATCCGGC GGGCCTCCTT CGCGAGATCG GCGAAAAGCA CTTTGCACCG
CTGATGGATC ATCCCGAGGC GCGCGCGCTG TGGTGGCCGC GCTTCGCCCG CATCGCCGCG
TGGTTCGGCA ATTGGGAGCA GGGGCGGCGC GCCGACGGAC GCCGCGTGTT CGCCGAGCGC
GACGGCAGCC TGTCCATCCC GCTCGACGGC GGCCGCAATT TCGTCCTGAC CGCGCGTGCC
GACCGGATCG AGCATCGGCC CGACGGCAGC TACGCGATCC TCGACTACAA GACCGGCAAT
CCGCCCAGCA GCAAGCAGGT GCGGCTGGGG CTGTCGCCGC AATTGACGCT GGAAGCCGCG
ATCCTGCGTG ACGGCGGTTT CCAGGACATC GACGCCGGCG CGTCGGTCAG CGAGCTGATG
TACGTCAAGC TCAGCGGCAA CTCGCCGCCG GGTCGCGAAC TACCCGTGAA GCTCGCGGTG
GGCAACGAAA CCCCGCAATC TCCCGACGAC GCCGCGATCG AAGCCCGCGC CAAGCTCGCG
GCGCTGGTCC GGCAATTCGA CGACGAGGCC CAGCCCTATC ACGCACTGGT GCTGTCGATG
TGGACGCAGC GCTACGGCCG CTACGACGAT CTGGCGCGGA TCAAGGAATG GTCGGCCGCC
GGCGGCGCCG GGGAGGAGCG GCGATGA
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| Protein sequence | MRVFSVPPSA PFLRTTIEAL VDGRLIEGFD ARAKPERLAE ATLYLPTRRA GRLARDIFLD
VLGTDAVLLP RIVPLGDVDE DELAFAQAAT GAADLDIPPA LDGLPRRLLL AQLIAAWAKG
LRPGDPQQSP LVVGGPASTL ALADDLARLI DDMATRGVDW AALDMLVPDA FDRYWRLTLD
FLKIAGQWWP LHLRETDRIE PAARRDLLIE AEAARLAAHR GGPVIAAGST GSMPATARLL
HAIAQLPHGA VVLPGLDTEL DEAAWQMIGA VHDKQGKLIS PPSPNHPQFA MHGLLARMGL
ERRDVLRLGE GERHGREVLA SEMMRPSSAT AAWHDRLADP AIDQLIGDGT HGLTLIEAPN
SEIEALTIAV VLREARERGQ SAALVTPDRA LARRVVAALG RWKLPVDDSG GDSLMDTQAG
IFARLAAETA LHGCEPATLL ALLKHPLLRL GRAAYGWRSA IETLELALLR GTRPAAGTEG
LAKEFARYRA ELTKLNSGEL SALHRAEPRA RLGDEALDEA HALIVALRAA LAPLESVGVE
PIDLCAFGQR HRAVLIALSI DHDDNAVAFE GPQGSALLKA FDDLAEVEPL SGVMVPPHDY
PELFETAFSD RIVRRPELAG AALRIYGPLE ARLTQHDRVV LGGLVEGVWP PAPRIDPWLS
RPMRHELGLD LPERRIGLSA HDFAQLLGAN EVILSHAAKV GGAPAVASRF LHRLEAVAGK
ARWSDIKARG ATYLDYALAL DRPDQVTPIA QPAPKPPREA RPLKLSVTAI EDWLRDPYTI
YAKFILGLSA LDPVDMPLSA ANRGSAIHEA LGDFTERFPD ALPDDPAGLL REIGEKHFAP
LMDHPEARAL WWPRFARIAA WFGNWEQGRR ADGRRVFAER DGSLSIPLDG GRNFVLTARA
DRIEHRPDGS YAILDYKTGN PPSSKQVRLG LSPQLTLEAA ILRDGGFQDI DAGASVSELM
YVKLSGNSPP GRELPVKLAV GNETPQSPDD AAIEARAKLA ALVRQFDDEA QPYHALVLSM
WTQRYGRYDD LARIKEWSAA GGAGEERR
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