Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0618 |
Symbol | |
ID | 3908311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 696546 |
End bp | 697928 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637882507 |
Product | peptidoglycan binding domain-containing protein |
Protein accession | YP_484240 |
Protein GI | 86747744 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.559119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.773085 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACGA TGCTGGCCGC AACCTTGATG ATCGCGAGCG CCACCGGCCT CGCCGCGGCG CAGACCGCGC CGCCGTCCGG TGCCGTGCCC GCCGTCAAGC CGAAGCCGGT GGCGACCACG CCGGTTCGCC CGGCGCTGCA GACCCCGGCC GAGACCGCGC AGGCGATGAC GCCCGCCGAG CGCCAGGCGA TCCAGTCGGA TCTCGCCTGG ACCGGCGACT ACAACGGCGT CATCAATGGC GAGCCGTCCG AGCGCATGGT CACGGCCATC AAGGCGTTCC AGAAGAATCA CGGCGGCAAG CAGACCGGCG TGCTCAATCC GCAGGAGCGC GCCCAGCTCA CCGAGGCCGC GCGAAAACTG CAGGGCAATG TCGGCTGGAA GCTGATCAGC GATATGGTCA CCGGCGCGCG GCTCGGGATT CCGGCCAAGC TGGTGCCGCA GCAGACCTCC GACGCCAATG GCAGCAAATG GGCGTCGTCG ACCGGCACCA TCCAGATCGT GCTGGCGCGG CGCAAGGAGG CCGGAATCAC CATCGCGAAA CTCGCCGATC AGGAGAAGAA GGAGCCGGGC CGCAAGGTCG GCTACAGCGC GATCAAACCG GATTTCTTCG TGCTGTCGGG CACCCAGGGT CTGAAGAAGT TCTACATGCG CGGCGCCTTC AAGGATTCCG AGGTCCGCAT TCTCACCATC CTGTACGATC AGGCCACCGA GGGCACGATG GAGCCGGTGG TGGTCGCGAT GTCGAGCGCG TTCAATCCGT TCCCCTCGGG CGCCCTGGCC GGTCCGCCGC CACGCAAAAA GGTCGAGTAC TCGACCGGCA CCATCGTCAG CGACGACGGC GCCATCCTGG CCGATCGCGA CGCGGTCGAG GCCTGCCAGT CGATCGTGAT CGCAGGACAA ATCGCAGCAC ACGGCAATGC CGACCTCGCC GCCACCGACA AGGCGCATGA TCTGGCGCTG CTGCGGATCT ATGGCGCGCG CGGCCTGAAG CCGCTGGCGC TCGGCAGCGG CGCGGCGAAA GCGTCGGTCG ATGTCGTCGG CATCGCTGAT CCGCAGAATC AGGGCGGTGG TTCGGCGGTC AGCGTCAGCA AGGCCGGCGT CACACCGGTC GGCAGCAATG GCGGTCTCGC GCTGGCACCC GCGCCCGGCC TCGGCTTCTC CGGCGCCCCG GCGCGTGACG CCGACGGCCG TTTCGCCGGC CTCGCGCTGC TGCGCCCGTC GGTCGTCGCC GGCGCAACCA ACGGCGCCGT CGCGCCGCAA GCGGCGCTGG TGGATGCCGA GACGGTGCGT AAGTTTCTCG TGAGCAACGC CATCAAGCCC GCCACCGACG CGCCCGCCGA CGCCAAGGCC AGCGTCGTGC GCGTGATCTG CGTGCGGAAG TAA
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Protein sequence | MRTMLAATLM IASATGLAAA QTAPPSGAVP AVKPKPVATT PVRPALQTPA ETAQAMTPAE RQAIQSDLAW TGDYNGVING EPSERMVTAI KAFQKNHGGK QTGVLNPQER AQLTEAARKL QGNVGWKLIS DMVTGARLGI PAKLVPQQTS DANGSKWASS TGTIQIVLAR RKEAGITIAK LADQEKKEPG RKVGYSAIKP DFFVLSGTQG LKKFYMRGAF KDSEVRILTI LYDQATEGTM EPVVVAMSSA FNPFPSGALA GPPPRKKVEY STGTIVSDDG AILADRDAVE ACQSIVIAGQ IAAHGNADLA ATDKAHDLAL LRIYGARGLK PLALGSGAAK ASVDVVGIAD PQNQGGGSAV SVSKAGVTPV GSNGGLALAP APGLGFSGAP ARDADGRFAG LALLRPSVVA GATNGAVAPQ AALVDAETVR KFLVSNAIKP ATDAPADAKA SVVRVICVRK
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