Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0609 |
Symbol | |
ID | 3908302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 685602 |
End bp | 686540 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637882498 |
Product | LysR family transcriptional regulator |
Protein accession | YP_484231 |
Protein GI | 86747735 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.663107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGACGC TCCGTCAGCT CCGCTACCTC TCCGCCCTCG CCCGCTTCGG CCATTTCGGC CGGGCGGCGG AAGCCTGCGC CGTGACCCAG CCGGCGCTGT CGATGCAGAT CGCCGATCTG GAGCGCACGC TCGGGGTCAA GGTTGTCGAA CGCCGGCCCG GCGAGGTGTT CCTGACCGAG ATCGGCCGCG AGATCGCCCG CCGCGGCGAG GACCTGCTGA CGGCGTCGCG CGATCTGGTG GATTTCGCCC GCCACCGCGC CCAGCCGCTG ACCGGCCGGC TGACGCTCGG GGTGATTCCG TCGCTGGCGC CGTATCTGCT GCCGAAGCTG CTGCCGCTGC TGCAGCAGCG CTACCCCGAA TTGCGGCTGG AGCTGCGCGA GAGCCAGACC CGGCAATTGG TCACCGAGGT CGGCAGCGGC GCACTCGACG CCGCCCTGCT GGCGCTGCCC GCCGGCAACC GCGAGCTCGA TGCGATCACG CTGTTCGACG ACGAATTCCT GCTGGCGGTG CCGGCCGACG ACCCGCGGCC CGAGACCGCG ACGGTGGCGG TCGACGAGAT CGACCAGTCG CGGCTGATCC TGCTCGAAGA CGGCCACTGC CTGCGCGACC AGGCGCTGGC GTTCTGCGCC ACCGCGCGCA ACCGCGCCAT CGCCATCGGC GGCACCAGCA CCACCACGTT CGGCGCCTCC AGCCTCACCA CGGTGATCCA GATGGTCGCC GGCGGCTACG GCGTGACGCT GATTCCGCAG ATCGCCGCCG AGATCGAGCG CCGCGACACC AGGGTGAAAT TCCTGCGGCT GCGGCGGCCG CAGCCCGGCC GCACCATCGG CCTGGCGTTC CGCAAGACCT CGCCGCGCCG CCAGGACTTC GAAGCGCTGG GCGAGGTGGT GCGGGAGGGA GTGGGCGGCC GCAGCAGCAT GGCGCAGCCG GCAGCCTGA
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Protein sequence | MVTLRQLRYL SALARFGHFG RAAEACAVTQ PALSMQIADL ERTLGVKVVE RRPGEVFLTE IGREIARRGE DLLTASRDLV DFARHRAQPL TGRLTLGVIP SLAPYLLPKL LPLLQQRYPE LRLELRESQT RQLVTEVGSG ALDAALLALP AGNRELDAIT LFDDEFLLAV PADDPRPETA TVAVDEIDQS RLILLEDGHC LRDQALAFCA TARNRAIAIG GTSTTTFGAS SLTTVIQMVA GGYGVTLIPQ IAAEIERRDT RVKFLRLRRP QPGRTIGLAF RKTSPRRQDF EALGEVVREG VGGRSSMAQP AA
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