| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0605 |
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| Symbol | |
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| ID | 3908298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 678925 |
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| End bp | 681081 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637882494 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_484227 |
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| Protein GI | 86747731 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAATA AGCATTCCGT CGAAATCGAT TGGGGTGGGC GTCCCCTCAA GCTCGAGACC
GGCAAGGTCG CGCGCCAGGC CGACGGCGCC GTCGTCGCCA CCTATGGCGA AACCATCGTG
CTCGCCACCG TGGTGGCCGC CAAGACGCCG CGCGAAGGCG TCGATTTCCT GCCGCTGACC
GTGGACTATC AGGAAAAGAC CTACGCGGCC GGCCGCATCC CCGGCGGTTA CTTCAAGCGC
GAGGGTCGCC CGACCGAGAA GGAGACGCTG GTCTCCCGCC TGATCGACCG CCCGATCCGT
CCGTTGTTCG CCGACGGCTG GCGCAACGAG ACCCAGGTGA TCGTCACCGT GCTGTCGCAC
GACATGGAGA ACGATCCGGA CATTCTGGCG ATGGTCGCCG CCTCGGCGGC GCTGACGCTG
TCCGGCGCGC CGTTCAAGGG CCCGATCGGC GCCGCCCGCG TCGGCTTCAT CAACGACGAA
TACGTGCTCA ACCCGGTGCT CGACGAGATG CCCGAGACCC AGCTCGAGCT GGTCGTCGCC
GGCACCGCCG ACGCGGTGCT GATGGTCGAA TCCGAAGCCA AGGAGCTGTC GGAAGAAATC
ATGCTCGGCG CGGTGATGTT CGGTCACCGT CACTTCCAGC CGGTGATCGA CGCGATCATC
GAGCTCGCCG AGAAGGCCGC CAAGGAGCCG CGCGAACTCG TCGTCATCGA CGATTCGGCG
ATCGAGAAGG AAATGCTCGG CCTGGTCGAG CAGGAACTGC GCGCCGCCTA CGCGATCCCG
GTCAAGCAGG AGCGCTACGC CGCGGTCGGC AAGGTCAAGG AAAAGGCGAT CGCGCACTTC
TTCCCGGAAG GCGAAGAGCC GAAATACGAC AAGCTGCGCA TCGCCGGCGT GTTCAAGGAG
CTCGAGGCCA AGATCGTTCG CTGGAACATC CTCGACACCG GCAAGCGCAT CGACGGCCGT
GACAGCAAGA CCGTCCGCAG CATCATCGCC GAAGCCGGCG TGCTGCCGCG CGCCCACGGT
TCGGCGCTGT TCACCCGCGG CGAGACCCAG GCGCTGGTGG TCACCACGCT CGGCACCGGC
GAAGACGAAC AGTACGTCGA CTCGCTGGCC GGAACGTACA AAGAGACGTT CCTGCTGCAC
TACAACTTCC CTCCCTATTC GGTCGGCGAG ACCGGCCGCC TCGGTGGTAC CAAGCGCCGA
GAGATCGGCC ACGGCAAGCT GGCGTGGCGC GCGATCCGTC CGGTGCTGCC GCCGCATCAC
GAGTTCCCCT ACACCATCCG CGTCGTCTCC GAGATCACCG AGTCGAACGG CTCGTCCTCG
ATGGCGTCGG TGTGCGGCGC CTCGCTGGCG CTGATGGATG CCGGCGTGCC GCTGAAGCGG
CCGACCGCGG GCATCGCGAT GGGGCTGATC CTGGAAGGCG AGCGCTTCGC GGTGCTCAGC
GATATTCTGG GCGACGAGGA TCATCTCGGC GACATGGACT TCAAGGTGGC CGGCACCGAG
CAGGGCATCA CCTCGCTGCA GATGGACATC AAGATCGCCG GCATCACCGA AGAGATCATG
AAGGTGGCGC TCGGCCAGGC CAAGGACGGC CGCATCCACA TCCTGGGTGA GATGTCCAAG
GCGCTCGACC GCGCCCGCGC CGAGCTCGGC GAACACGCGC CGCGCATCGA GACCTTCAAG
ATCCCGACCG ACAAGATCCG TGAAGTGATC GGCACCGGCG GCAAGGTGAT CCGCGAGATC
GTCGAGAAGA CCGGCGCCAA GGTCAACATC GAGGACGACG GCACCGTCAA GGTCGCCTCC
AGCGATGGTG AGTCGATCAA GGCTGCTATC AAGTGGATCA AGTCGATCGC CTCCGATCCG
GAAGTCGGCG AGATCTACGA AGGCACCGTC GTCAAGGTGA TGGAGTTCGG CGCCTTCGTG
AACTTCTTCG GCGCCAAGGA CGGCCTGGTG CATATCAGCC AGCTCGCCTC CGGCCGCGTG
CAGAAGACCT CCGACGTCGT CAAGGAAGGC GACAAGGTCA AGGTCAAGCT GCTCGGCTTC
GACGATCGCG GCAAGACCCG GCTGTCGATG CGCGTGGTCG ATCAGGAGAC CGGCGAAGAC
CTCGAGGCCA AGCAGAAGGC CGAAGGCGAA GCCCCGGCCC AGGCCACCGG CGAGTAG
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| Protein sequence | MFNKHSVEID WGGRPLKLET GKVARQADGA VVATYGETIV LATVVAAKTP REGVDFLPLT
VDYQEKTYAA GRIPGGYFKR EGRPTEKETL VSRLIDRPIR PLFADGWRNE TQVIVTVLSH
DMENDPDILA MVAASAALTL SGAPFKGPIG AARVGFINDE YVLNPVLDEM PETQLELVVA
GTADAVLMVE SEAKELSEEI MLGAVMFGHR HFQPVIDAII ELAEKAAKEP RELVVIDDSA
IEKEMLGLVE QELRAAYAIP VKQERYAAVG KVKEKAIAHF FPEGEEPKYD KLRIAGVFKE
LEAKIVRWNI LDTGKRIDGR DSKTVRSIIA EAGVLPRAHG SALFTRGETQ ALVVTTLGTG
EDEQYVDSLA GTYKETFLLH YNFPPYSVGE TGRLGGTKRR EIGHGKLAWR AIRPVLPPHH
EFPYTIRVVS EITESNGSSS MASVCGASLA LMDAGVPLKR PTAGIAMGLI LEGERFAVLS
DILGDEDHLG DMDFKVAGTE QGITSLQMDI KIAGITEEIM KVALGQAKDG RIHILGEMSK
ALDRARAELG EHAPRIETFK IPTDKIREVI GTGGKVIREI VEKTGAKVNI EDDGTVKVAS
SDGESIKAAI KWIKSIASDP EVGEIYEGTV VKVMEFGAFV NFFGAKDGLV HISQLASGRV
QKTSDVVKEG DKVKVKLLGF DDRGKTRLSM RVVDQETGED LEAKQKAEGE APAQATGE
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