Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0593 |
Symbol | |
ID | 3908286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 665372 |
End bp | 666502 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637882482 |
Product | HlyC/CorC family transporter |
Protein accession | YP_484215 |
Protein GI | 86747719 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGACG GCGACAGAGC GCAGAGCGCA GCGCAGCCAG CGGAGCAGGA CTTACCACGC GGCCAGCAAC TGCCGGCGGT GGTGCATCAG GGCGAGGTGC TGCGGCCGGC CGGCGCGGCC TGGCTGATGC GCGCGATCCG TTCGCTGTTC GGCTGGAAGC CCGGCTCGGT GCGCGACGAC CTGCAGGTCG TGCTAGACAC CAGCCCGGCG GACGACACCG GCTTCAGCGC GCTCGAGCGC ACCATGCTGC GCAACATCCT CGGGCTGCAC GAGCGTCGCA TCGCCGACGT CATGGTGCAT CGCGCCGACA TCGTCGCGAT CAAGCAGGAC ATCGCGCTCG GCGAACTGAT GAGCCTGTTC GAGGGCGCGG CGCATTCGCG CCTCGTGGTC TATGACGAGA CGCTCGACGA TCCGGTCGGC CTGGTCCACA TCCGCGACCT CGTCGCGTTC ATGACCGCCA GGGCCAAGGT GGCGCCCGAG ACCGTGGCCA AGCGCAAGAA GGCGCTGCCG GCCGGGCTCG ACCTGCGCGC GATCGATCTG AAGATGCCGC TGACCGAGAC CGGCATCATC CGCAAGCTGC TGTACGTGCC GCCGTCGATG CGCGCGATCG ATCTGCTGGC GCAGATGCAG GCCGCCCGCA TCCATCTGGC GCTGGTGGTC GACGAATATG GCGGCACCGA CGGCCTGGTC TCGATCGAGG ACATCGTCGA GCAGATCGTC GGCGAGATCG ACGACGAGCA CGACAGCGCC GAGCCGCCGT CGATCGTGCA GCAGGCCGAC GGCTCGTTCG TCGCCGACGC CCGCACCAGC CTCGAGGATG CGCGCGAGAT GATCGGCGAC GGCTTCGTCA CCGGCGAAGC CGGCGAGGAC GTCGAGACGC TCGGCGGCTA TCTGGTCAAT CATGTCGGCC GGCTGCCGGT GCGCGGCGAA GTGATCTCCG GCCCCGGCAA TTACGAGATC GAGGTGCTGG ACGCCGACCC GCGCCGCGTC AAGCGGCTGC GCATCGGCAT TCGCAAGGAA CGCCCCGTCG TGCGGCCGCG CGAGACGCGG CGGCGCGAGC CGGCCTCCGA TCAGGCCGCC ACCACACCTG CCGATCCGAC CCATCCGAAT CCTTCGCCGC CCGGCGACTG A
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Protein sequence | MPDGDRAQSA AQPAEQDLPR GQQLPAVVHQ GEVLRPAGAA WLMRAIRSLF GWKPGSVRDD LQVVLDTSPA DDTGFSALER TMLRNILGLH ERRIADVMVH RADIVAIKQD IALGELMSLF EGAAHSRLVV YDETLDDPVG LVHIRDLVAF MTARAKVAPE TVAKRKKALP AGLDLRAIDL KMPLTETGII RKLLYVPPSM RAIDLLAQMQ AARIHLALVV DEYGGTDGLV SIEDIVEQIV GEIDDEHDSA EPPSIVQQAD GSFVADARTS LEDAREMIGD GFVTGEAGED VETLGGYLVN HVGRLPVRGE VISGPGNYEI EVLDADPRRV KRLRIGIRKE RPVVRPRETR RREPASDQAA TTPADPTHPN PSPPGD
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