Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0582 |
Symbol | |
ID | 3908275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 655394 |
End bp | 656950 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637882471 |
Product | integral membrane protein MviN |
Protein accession | YP_484204 |
Protein GI | 86747708 |
COG category | [R] General function prediction only |
COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0591354 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGTC CGATTCTCAC CGTCTCCGCC GGCACGCTGA CGTCCCGCCT GCTCGGATTC GTGCGCGACG CGCTGGTCGC GGCGCTGCTC GGCGCCGGCG CGGTGGCGGA CGCGTTTCTG CTGGCGTTCC AGCTCGTCAA TGTGGCGCGG CGGCTGCTGA CCGAAGGCGC GCTGAATGCG GCGCTGGTGC CGGCGTGGCT GCGGGTCCGC GAGCACAACG GCCCGGTCGC CGCCGCCGCC TTCGCCGGCC GGCTGCTCGG CACCGTGGCG CTGGCGACGC TCGTGCTGGC GCTGCTGCTC GGCGTGTTCA TGCCGCTGTT GATCGCGCTC TTGGCGCCGG GCTTTCTCGG CCATCCGACG CTCGCGATGG CGGTGCGCGA TGCCCGGCTG ATGCTGCCTT ATCTGGCCTT CGCCGGCCCG GTCGCGGTGA TGATGGGGCT GTTCAACGCG AACGGCAAAG TCGGCCTCAC CGCGTTCTCG CCGCTGCTGT TCAACATCTT GCTGATCACC GTCACCGGCG CGCTGTTGCT GTGGCACGCC GACGAGACCC GCGCCGCGCT GATCCTGTCC GCCACCGTCG GCATCGCCGG GCTGCTGCAA CTCGGCATCC TCGTGTTCAA CGGCCGCGGC GAGCGCCTGG CGACGCCGCT GCGGGTGTCG TTCGACACCG CGACGCGCGC CTTCTTCGCC AAGGCGATCC CCGGCATGAT CGCCAATTCC GGGCCGCAAT TGCTGATCGT GATCGGCGCG GTCGTGGCGT CGGGGATGCC TTCCGCGGTG TCGTGGCTGT ATTTCGCCAA CCGGCTGATC GAGCTGCCGC TCGGCATCGT CGGCGTGGCG ATGGGCGCGG TGCTGGTGCC GGAACTGGCG CGCGCGGTGC GCGGCGACGA CCGTGCCGCC TTGTCGGACG CCGCCTCGCG CGGGCTGGAG CTCGCGCTCG GCGTGGCGTT GCCGGCGACG CTGGGGCTGA TCGTGCTGAG CGGGCCGATC GTGCGGGTAC TGTTCGAGCA CGGCGCGTTC GGCGCCGCCG ACACCGCCGC GACCGCGCAG GCGCTGGCTC TGCTGGCGCT CGGGCTGCCG GCGCAGGTGC TGGCGAAGAA CTGGTCGGCG GCGTTCTTCG CCCGCGAGGA CACGCGCACG CCGCTGCTCG CCACGCTGCT CGCTTTGGCC GTGGCGCTCG CCGCCGCGCT GCTGCTCGGG CGGCTATTCG GCGCCGCCGG CGTCGCCGTC GCGATCGCGC TCGGCGCCTG GAGCAACGCA GCCCTGCTGC TGGGACGCGG CCTGAGCCGC TTCGGCGTTA CGGTCGATCC GGTGGCGCGG CGCCGCGTCG CGCTGATCGT GCTCGCGGCC GGCGTGATGG GCGGGCTGCT GGCGCTGAAG GCGGCCTTCG TGCTGCCGCT GGTCGCGCAG GCCTCGACGC TGGTGCAGGC GGCGGTGCTC GGCGTCCTGA TCGCCGGCGC TCTGATCATC TACGCCGCGC TGCTGATGCT GTTCGGCGTG GTGCGCCCCG CAGCGGCGCT CGGGGCGCTG CGGCGGCCGC GCGGCTTGCG CGGCTAG
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Protein sequence | MIRPILTVSA GTLTSRLLGF VRDALVAALL GAGAVADAFL LAFQLVNVAR RLLTEGALNA ALVPAWLRVR EHNGPVAAAA FAGRLLGTVA LATLVLALLL GVFMPLLIAL LAPGFLGHPT LAMAVRDARL MLPYLAFAGP VAVMMGLFNA NGKVGLTAFS PLLFNILLIT VTGALLLWHA DETRAALILS ATVGIAGLLQ LGILVFNGRG ERLATPLRVS FDTATRAFFA KAIPGMIANS GPQLLIVIGA VVASGMPSAV SWLYFANRLI ELPLGIVGVA MGAVLVPELA RAVRGDDRAA LSDAASRGLE LALGVALPAT LGLIVLSGPI VRVLFEHGAF GAADTAATAQ ALALLALGLP AQVLAKNWSA AFFAREDTRT PLLATLLALA VALAAALLLG RLFGAAGVAV AIALGAWSNA ALLLGRGLSR FGVTVDPVAR RRVALIVLAA GVMGGLLALK AAFVLPLVAQ ASTLVQAAVL GVLIAGALII YAALLMLFGV VRPAAALGAL RRPRGLRG
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